Detail information of GWHGAAEX006411/evm.TU.scaffold_180.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|502131936|ref|XP_004501158.1|1.39E-51PREDICTED: dehydration-responsive element-binding protein 3-like [Cicer arietinum]
Swissprottr|Q9LYD3|DREB3_ARATH7.00E-49Dehydration-responsive element-binding protein 3
trEMBLtr|B7FI90|B7FI90_MEDTR3.00E-51Uncharacterized protein {ECO:0000313|EMBL:AFK43951.1}
TAIRAT5G115902.00E-48Integrase-type DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018116770631677566+
Transcript Sequence

Network for GWHGAAEX006411

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP224728.70E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.930
SRR2545915Juvenile tuber23.390
SRP108465SRR5643513five period of Gastrodia elata146.260
SRR5643514five period of Gastrodia elata107.940
SRR5643515five period of Gastrodia elata130.810
SRR5643524five period of Gastrodia elata78.970
SRR5643525five period of Gastrodia elata235.780
SRR5643528five period of Gastrodia elata146.870
SRR5643658five period of Gastrodia elata191.550
SRR5643659five period of Gastrodia elata628.240
SRR5643660five period of Gastrodia elata715.870
SRR5643661five period of Gastrodia elata846.660
SRR5643662five period of Gastrodia elata434.320
SRR5643663five period of Gastrodia elata642.820
SRR5643664five period of Gastrodia elata514.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_154.480
SRR6049655Rhizomagastrodiae_C368-T10_good_189.090
SRR6049656Rhizomagastrodiae_C368-T07_good_170.350
SRR6049657Rhizomagastrodiae_C368-T07_good_145.020
SRR6049658Rhizomagastrodiae_C368-T04_good_128.000
SRR6049659Rhizomagastrodiae_C368-T04_good_135.150
SRR6049660Rhizomagastrodiae_C368-T01_good_156.280
SRR6049661Rhizomagastrodiae_C368-T04_good_150.710
SRR6049662Rhizomagastrodiae_C368-T01_good_169.720
SRR6049663Rhizomagastrodiae_C368-T01_good_160.920
SRR6049664Rhizomagastrodiae_C368-T10_good_184.140
SRR6049665Rhizomagastrodiae_C368-T10_good_184.140
SRP279888GastroGastrodia elata tuber 373.96
JuvenJuvenile tuber67.99
Mother_GastroMother tuber of Gastrodia elata 2.79
Mother_JuvenMother tuber of Juvenile 23.47