Detail information of GWHGAAEX006422/evm.TU.scaffold_181.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695031272|ref|XP_009403145.1|8.94E-96PREDICTED: U-box domain-containing protein 21-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q5PNY6|PUB21_ARATH4.00E-49U-box domain-containing protein 21
trEMBLtr|I1SV59|I1SV59_9POAL2.00E-85CMPG {ECO:0000313|EMBL:AEF30545.1}
TAIRAT5G374901.00E-48ARM repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000177527353529051-
Transcript Sequence

Network for GWHGAAEX006422

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.590
SRR2545915Juvenile tuber4.800
SRP108465SRR5643513five period of Gastrodia elata25.080
SRR5643514five period of Gastrodia elata12.210
SRR5643515five period of Gastrodia elata63.750
SRR5643524five period of Gastrodia elata9.680
SRR5643525five period of Gastrodia elata41.800
SRR5643528five period of Gastrodia elata30.280
SRR5643658five period of Gastrodia elata15.200
SRR5643659five period of Gastrodia elata29.680
SRR5643660five period of Gastrodia elata4.860
SRR5643661five period of Gastrodia elata6.370
SRR5643662five period of Gastrodia elata28.510
SRR5643663five period of Gastrodia elata16.970
SRR5643664five period of Gastrodia elata78.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_161.560
SRR6049655Rhizomagastrodiae_C368-T10_good_180.530
SRR6049656Rhizomagastrodiae_C368-T07_good_135.260
SRR6049657Rhizomagastrodiae_C368-T07_good_140.570
SRR6049658Rhizomagastrodiae_C368-T04_good_157.060
SRR6049659Rhizomagastrodiae_C368-T04_good_166.800
SRR6049660Rhizomagastrodiae_C368-T01_good_1122.690
SRR6049661Rhizomagastrodiae_C368-T04_good_183.590
SRR6049662Rhizomagastrodiae_C368-T01_good_122.790
SRR6049663Rhizomagastrodiae_C368-T01_good_162.330
SRR6049664Rhizomagastrodiae_C368-T10_good_149.940
SRR6049665Rhizomagastrodiae_C368-T10_good_149.940
SRP279888GastroGastrodia elata tuber 12.91
JuvenJuvenile tuber2.10
Mother_GastroMother tuber of Gastrodia elata 133.16
Mother_JuvenMother tuber of Juvenile 58.23