Detail information of GWHGAAEX006435/evm.TU.scaffold_181.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17642.00E-345'-AMP-activated protein kinase, gamma subunit
nrgi|743795009|ref|XP_010924338.1|3.90E-146PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Elaeis guineensis]
Swissprottr|Q8LBB2|KING1_ARATH5.00E-35SNF1-related protein kinase regulatory subunit gamma-1
trEMBLtr|M0S6E1|M0S6E1_MUSAM2.00E-121Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P09000_001}
TAIRAT3G485302.00E-34SNF1-related protein kinase regulatory subunit gamma 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017717327251798100+
Transcript Sequence

Network for GWHGAAEX006435

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00571.27CBS1932450.00057
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.630
SRR2545915Juvenile tuber13.180
SRP108465SRR5643513five period of Gastrodia elata7.930
SRR5643514five period of Gastrodia elata8.860
SRR5643515five period of Gastrodia elata8.600
SRR5643524five period of Gastrodia elata7.970
SRR5643525five period of Gastrodia elata10.090
SRR5643528five period of Gastrodia elata7.420
SRR5643658five period of Gastrodia elata8.610
SRR5643659five period of Gastrodia elata9.390
SRR5643660five period of Gastrodia elata10.650
SRR5643661five period of Gastrodia elata10.280
SRR5643662five period of Gastrodia elata9.230
SRR5643663five period of Gastrodia elata8.810
SRR5643664five period of Gastrodia elata8.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.740
SRR6049655Rhizomagastrodiae_C368-T10_good_113.730
SRR6049656Rhizomagastrodiae_C368-T07_good_113.020
SRR6049657Rhizomagastrodiae_C368-T07_good_19.670
SRR6049658Rhizomagastrodiae_C368-T04_good_112.750
SRR6049659Rhizomagastrodiae_C368-T04_good_113.250
SRR6049660Rhizomagastrodiae_C368-T01_good_111.280
SRR6049661Rhizomagastrodiae_C368-T04_good_113.480
SRR6049662Rhizomagastrodiae_C368-T01_good_114.830
SRR6049663Rhizomagastrodiae_C368-T01_good_115.670
SRR6049664Rhizomagastrodiae_C368-T10_good_115.880
SRR6049665Rhizomagastrodiae_C368-T10_good_115.880
SRP279888GastroGastrodia elata tuber 10.67
JuvenJuvenile tuber11.61
Mother_GastroMother tuber of Gastrodia elata 12.77
Mother_JuvenMother tuber of Juvenile 12.50