Detail information of GWHGAAEX006438/evm.TU.scaffold_182.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|313203852|ref|YP_004042509.1|9.00E-159glyceraldehyde-3-phosphate dehydrogenase [Paludibacter propionicigenes WB4]
KOGKOG06570Glyceraldehyde 3-phosphate dehydrogenase
nrgi|410027508|gb|AFV52793.1|0glyceraldehyde 3-phosphate dehydrogenase [Cymbidium faberi]
Swissprottr|Q7FAH2|G3PC2_ORYSJ0Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic
trEMBLtr|K4PDQ2|K4PDQ2_9ASPA0Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}
TAIRAT1G134400glyceraldehyde-3-phosphate dehydrogenase C2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001794019842630+
Transcript Sequence

Network for GWHGAAEX006438

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00044.23Gp_dh_N2996.10E-29
PF02800.19Gp_dh_C1513081.50E-68
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00134GAPDH, gapA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Carbon fixation in photosynthetic organismsmap00710
HIF-1 signaling pathwaymap04066

Gene Ontology

GO term OntologyName
GO:0006006Biological Processglucose metabolic process
GO:0055114Biological Processoxidation-reduction process
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0051287Molecular FunctionNAD binding
GO:0050661Molecular FunctionNADP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.190
SRR2545915Juvenile tuber2.020
SRP108465SRR5643513five period of Gastrodia elata66.270
SRR5643514five period of Gastrodia elata73.480
SRR5643515five period of Gastrodia elata72.420
SRR5643524five period of Gastrodia elata76.990
SRR5643525five period of Gastrodia elata59.490
SRR5643528five period of Gastrodia elata165.150
SRR5643658five period of Gastrodia elata70.220
SRR5643659five period of Gastrodia elata47.410
SRR5643660five period of Gastrodia elata48.310
SRR5643661five period of Gastrodia elata49.190
SRR5643662five period of Gastrodia elata50.310
SRR5643663five period of Gastrodia elata56.080
SRR5643664five period of Gastrodia elata48.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.140
SRR6049655Rhizomagastrodiae_C368-T10_good_168.310
SRR6049656Rhizomagastrodiae_C368-T07_good_129.280
SRR6049657Rhizomagastrodiae_C368-T07_good_120.130
SRR6049658Rhizomagastrodiae_C368-T04_good_12.020
SRR6049659Rhizomagastrodiae_C368-T04_good_10.270
SRR6049660Rhizomagastrodiae_C368-T01_good_16.240
SRR6049661Rhizomagastrodiae_C368-T04_good_11.500
SRR6049662Rhizomagastrodiae_C368-T01_good_114.710
SRR6049663Rhizomagastrodiae_C368-T01_good_10.680
SRR6049664Rhizomagastrodiae_C368-T10_good_189.490
SRR6049665Rhizomagastrodiae_C368-T10_good_189.490
SRP279888GastroGastrodia elata tuber 29.19
JuvenJuvenile tuber37.38
Mother_GastroMother tuber of Gastrodia elata 67.77
Mother_JuvenMother tuber of Juvenile 181.33