Detail information of GWHGAAEX006442/evm.TU.scaffold_182.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|294495847|ref|YP_003542340.1|2.00E-30bis(5'nucleosyl)-tetraphosphatase, ApaH [Methanohalophilus mahii DSM 5219]
KOGKOG03744.00E-173Serine/threonine specific protein phosphatase PP1, catalytic subunit
nrgi|567126928|ref|XP_006391677.1|1.33E-173hypothetical protein EUTSA_v10023593mg [Eutrema salsugineum]
Swissprottr|P48488|PP1_MEDSV1.00E-179Serine/threonine-protein phosphatase PP1
trEMBLtr|V4KNP8|V4KNP8_EUTSA5.00E-174Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}
TAIRAT1G640404.00E-173type one serine/threonine protein phosphatase 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000179750159774066+
Transcript Sequence

Network for GWHGAAEX006442

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16891.4STPPase_N6532.80E-16
PF00149.27Metallophos552174.30E-30
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06269PPP1C mRNA surveillance pathway map03015
Hippo signaling pathwaymap04390
cAMP signaling pathwaymap04024
cGMP-PKG signaling pathwaymap04022
Meiosis - yeastmap04113
Oocyte meiosismap04114
Cellular senescencemap04218
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Platelet activationmap04611
Insulin signaling pathwaymap04910
Oxytocin signaling pathwaymap04921
Adrenergic signaling in cardiomyocytesmap04261
Vascular smooth muscle contractionmap04270
Dopaminergic synapsemap04728
Long-term potentiationmap04720
Inflammatory mediator regulation of TRP channelsmap04750

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms61.340
SRR2545915Juvenile tuber66.140
SRP108465SRR5643513five period of Gastrodia elata42.980
SRR5643514five period of Gastrodia elata58.270
SRR5643515five period of Gastrodia elata40.920
SRR5643524five period of Gastrodia elata55.270
SRR5643525five period of Gastrodia elata46.480
SRR5643528five period of Gastrodia elata34.860
SRR5643658five period of Gastrodia elata47.580
SRR5643659five period of Gastrodia elata30.830
SRR5643660five period of Gastrodia elata42.730
SRR5643661five period of Gastrodia elata33.950
SRR5643662five period of Gastrodia elata34.050
SRR5643663five period of Gastrodia elata35.950
SRR5643664five period of Gastrodia elata32.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_154.830
SRR6049655Rhizomagastrodiae_C368-T10_good_140.800
SRR6049656Rhizomagastrodiae_C368-T07_good_159.320
SRR6049657Rhizomagastrodiae_C368-T07_good_152.840
SRR6049658Rhizomagastrodiae_C368-T04_good_152.160
SRR6049659Rhizomagastrodiae_C368-T04_good_168.690
SRR6049660Rhizomagastrodiae_C368-T01_good_154.110
SRR6049661Rhizomagastrodiae_C368-T04_good_152.720
SRR6049662Rhizomagastrodiae_C368-T01_good_143.910
SRR6049663Rhizomagastrodiae_C368-T01_good_152.390
SRR6049664Rhizomagastrodiae_C368-T10_good_171.290
SRR6049665Rhizomagastrodiae_C368-T10_good_171.290
SRP279888GastroGastrodia elata tuber 46.85
JuvenJuvenile tuber49.84
Mother_GastroMother tuber of Gastrodia elata 60.45
Mother_JuvenMother tuber of Juvenile 57.38