Detail information of GWHGAAEX006444/evm.TU.scaffold_182.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG2908026S proteasome regulatory complex, subunit RPN9/PSMD13
nrgi|743779124|ref|XP_010920026.1|0PREDICTED: LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 13 homolog B-like [Elaeis guineensis]
Swissprottr|Q8GYA6|PS13B_ARATH026S proteasome non-ATPase regulatory subunit 13 homolog B
trEMBLtr|F6HT17|F6HT17_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB57827.1}
TAIRAT5G456200Proteasome component (PCI) domain protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000179927440948293-
Transcript Sequence

Network for GWHGAAEX006444

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01399.26PCI2423447.10E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03039PSMD13, RPN9 Proteasome map03050

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms149.250
SRR2545915Juvenile tuber172.300
SRP108465SRR5643513five period of Gastrodia elata93.980
SRR5643514five period of Gastrodia elata110.170
SRR5643515five period of Gastrodia elata90.210
SRR5643524five period of Gastrodia elata106.500
SRR5643525five period of Gastrodia elata46.740
SRR5643528five period of Gastrodia elata58.810
SRR5643658five period of Gastrodia elata46.750
SRR5643659five period of Gastrodia elata89.880
SRR5643660five period of Gastrodia elata85.140
SRR5643661five period of Gastrodia elata89.240
SRR5643662five period of Gastrodia elata91.100
SRR5643663five period of Gastrodia elata95.100
SRR5643664five period of Gastrodia elata90.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_191.730
SRR6049655Rhizomagastrodiae_C368-T10_good_1124.900
SRR6049656Rhizomagastrodiae_C368-T07_good_192.590
SRR6049657Rhizomagastrodiae_C368-T07_good_1103.340
SRR6049658Rhizomagastrodiae_C368-T04_good_181.130
SRR6049659Rhizomagastrodiae_C368-T04_good_183.260
SRR6049660Rhizomagastrodiae_C368-T01_good_188.030
SRR6049661Rhizomagastrodiae_C368-T04_good_180.950
SRR6049662Rhizomagastrodiae_C368-T01_good_196.300
SRR6049663Rhizomagastrodiae_C368-T01_good_186.510
SRR6049664Rhizomagastrodiae_C368-T10_good_1110.630
SRR6049665Rhizomagastrodiae_C368-T10_good_1110.630
SRP279888GastroGastrodia elata tuber 112.41
JuvenJuvenile tuber176.43
Mother_GastroMother tuber of Gastrodia elata 91.63
Mother_JuvenMother tuber of Juvenile 139.93