Gene detail

Detail information of GWHGAAEX006445/evm.TU.scaffold_182.15

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000179	1222915	1244341	-

Transcript Sequence
>GWHTAAEX006445 ATCCAATCCGTGGACCCAAAATCTGAAAAAGTATTATAACTTTAAAATTACTTCTTATGGAGTAATCAAGTTATTAAATTTCATTAGTTTTAACATACCTGTATGCGTGAATATAAACAAAAAAATCTGTCATAAATACAATAATGTAAACTGACAAAGCCGCAATACAAATTAAATGAACAAATAATGCAATGCAGATAAATAAAAGTGATATATGCACAACAAGCACTTTAAAGACACCAACTTGTAAATGATTAAGTCAAACTCAACAAAATATAGAATATGCAATGTCTAAATTGAACTGATAACAAATCACAAGAACAGTAAGTCTCTACTAACATAGTTCACCATATTAAATAATTAAGGGCTAGACAAAAAGAAAAAAAAGTAGCATAATTCCACTACAAAACCAGGCCTTTATTCTCAAATACTATGAAAACAAAAACTCTGCAGATTAGAATCCAAGCAGATTGAGTATGAAGAGTGCCTAAGATCCTCAAATAAGCCAAGAACAAATTTACTACGATGGAACTTATCGTCTTCTCTCTCGTCTCACTTAAGAGACTTATCCTTTTAGTCGGCCAAATGGCGAATCATATTCCGGTATAAGAGCCCAGGTTTTATTGAAGGTGCAATGGTGAACACAGTAAGAGGTGCCAACACTCGTTCCAAAGAGACAAGAAACCTATATCTATTCTGTAATAGAACGAGCAACAATCTGTATCGCCTAGTGTTTTCAGCAATGCAAGCCTGTCTTCACATATGTGAGCCTTGATGATAAGGCAGATGAAGACAATGTCACAATCTGAAACATAAATTAAGTTATAGATTGATGCATAGATGCAATTGTAGCAGCAATTGTGAATGTAAAGATAAAAGAGTTCGAGTATGTGCATATTATCAATCTAAAATGAGTTTGTTCGATGAGATTTGCACATGAATTAGGACTCCCACCAACTAGTAACTTTAATTCAAGTAGAAAAGGTTGGTATTTGATCAGTTTTAATTTGAACTACAAAGGCTGGTGCCAGCTTTGAAAAAGCCATTTATATGAATATCTCCCATAATAATTTGTCGTATATCACCAAAATACATCTGTTGAATTCCTGTAGAGCTGAAAAACAGTTGTCTAGGAACGAAATGTTGAGATCCCACAAAAAAACTGTAGGAATACTGTGATGTTACCTGCTATTTGATGTTCACGTCACAGTAATCCATAATCACGCAAAACATAATTCAGGTTGGGAAAGTGACATCCAGTTGATTGGGTAGAATGTTACTGATCTCAACAAGTGCTAAATGAAAAGAGTTTCATGTAATTATTGGGAGTATACTATGGCTCATAATGTCAGCCTATTGGTACATTGAAGGTAAAAACTTGCTTTCGAGCAAAATAAAAGAATATAATTACTCACACAAACCTCAAATTTAATGCCTAATCAATGATTTTACAAAACTATCACTTAACCTTATAAATTCATCAACATGCAATTATTGATATTGCTTAAATAAGATGGCAATTTTGGTGTAATCCTGAAAACTTAAGTTATAGTTTTGAAAAGCATTAAGTTCCAGTGTTAAATGTGTAAAAAGAATGTATGGAATTCCTCCAAATAAAAAATAGAATAAACACTTAGTATGATCGAGTTCACAAAGACAGAGATATATAACACTATAGATAACTTGAATCATTAAGGACTGAATCGCTTCATCCTCCATTCCTAATATCTAAATCATAGCCAATAATATGTTCCATAATAGACTCACAAAACAAGATCAATGGCATAGGTTCTAGGTACACAATCTATTGGTTTATCATTGAAACTCCCTTGACCTTTCAAAACTAATATATTTCCCAGACAATAACCGAAATTGCATCAAATATGATGAATTCAACCATAAATTCAAACAAGAAAAGTAACCGCATATGGCATAATTAAAGAAGTATGCTTGACATATAAGTGTGGTTTGATGAATAAATTTCCTTCAAAAGAAGTGCAATGATTCGGCTCATGCTTGTTCCATAATACATGAAACATTTCCACAAATGATTCGGCTCGTGCTTGTTCCATGATTTCGGCACATGCTCATTTTAGGGAGTAACTCTGAAGGCTATTCTAGGGTTTCCTCCGTCGGCTCCGCGACGGACTGTGGCTCTTCTCCAGCGAGTGGCTTCTTCTCTTCTGAACACAAGTGATCTCAGTCCTTTGTATTTTTTGCTATTATTGGTCTTTACTCAAATATGTGGTAAGATGGAAGTCCCTCCATCAATGAGATCCTTTAGAGAGATCGTAGAGAGTTCTACTCCTACGATCTCCAAAGAGATTTCTAATTTCAAAGGAGCTCCTGCTATTTTCTTCTCTGATGATGAAATTTTATCTCTTGCTGCCCCCCACTCCCTAACCCTAATCGGAAAATTCAAAAAAAAAAACCAAAATTTGGCCTTGTCTCTGGTTTTATCAATAGCTTGAAACTTAACGGACCTGTTAATATCCGTGAGTTCGATGCTCAACGGGTTTTTTTAGCTTCTCCTCTGACTTAAATTACGCTAGAGTGTTTTCTAAAGGCTCATACGATCTAAAAGGCAATACCATGAAGTTCTACAAATGGGATCCCTTTATAGACCTCACTTTGGATTCACCTATAGTCCCTATCTAGGTCAACCTCCCTGGTTTGCATCTGCATTTTGTCAAAAAAGAAATCTTATTTACTATAGCTAAAGCTATAGGATTACCATTACAGCTTGATAGAAACACGGCTACTCAAAGGAATGTAGCAGCTCCCATTATTCTCATTGAACTAAATCTTTCCTTACCACTCCCAAAAAAGATCTGGCTGGGTTCACCTGCTCACAGCTACTTTCAATCTATTTGCTATAAAAACCTACCTTTATATTGTAACTGGTGTCAATCTCTAAGACATAATTTCAAACTTGTCCCCATACTCAAGGAAATAGCACTTTAATTCCAGCTAGTAGAAATCTGAACCCCATCACTAATGTTGCTATTTTAGCTAACAACTTAGAAGTTACTTCTGGGAACTGTCAAAAGGATATGCTTGTTTCTTCTGATTTAGAAAAAGTCAATGATAATGCTCATAAAGTTATATGTGCTAAGAACTACAATGTTGCTAATGATGAGAATAACAGGGTTAATGCCAATATTGACAAGGTTAATTTTGTCAATGAGGAAATCAATGACACTGCCAATACTGCTGCTAATGATACTGAAGTGATCAACCACAATGCTGATCCTGTGGTTAATGATTTGTCAGCTAATTTAAGCAATTTTCATGTCATATCTAATGCTGCTTTAAGTTCTAATATTGTTACTAATATTAAGGTTATTTGCTTTGAGATCATTGAACAAGACCTTGAAAAAATTATTATTGATGACACTAGCCCTTGTTTAGGTCTTGCTGAAACTGATGTTACCGAAAAAATTGTTATTGATGACACTGCCCCTTGTTTAGCACTTGCTGAAACTGCTGTACCGATAATACTCAGAATGCTGAAAAGGCACCACAACAGAAAGAAATGTTTTACTGATTTTCATTCTGAGACCATAAATTATAAAAACAATGCTAATGATATTCCTGTTTCAGATTTTGCAGGCGCTGATACTCTTATTGAAAAAGATTCTTCTATAGCTTGCCATTCTTCAGGTTCTCCTGGAATAAGCAGCAGGAAATCCAATGACAACAGCAGCACTGCCACCTCAACTGATAATCTGAAACAGGCCCAAATTGCTAACCAGGAGTCAACCAGAATATTCAAGGAATCTTTACTAGTCATGCATGATTTAGAGAAAAAAATGGAAGTCTTTACCAAGCCAAAAAGCCCTTTCAAAAATCAAACGGACCGACTTCATTATAAAGCTAAAGCTAGCTTAAAGGCCAGGGATTCAGCCTTTCAATATGCATGCATGAAGCTAAAGGGACTCCGATTGTTAAGAAACCCTTGA

Network for GWHGAAEX006445

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.110
SRP064423	SRR2545915	Juvenile tuber	0.230
SRP108465	SRR5643513	five period of Gastrodia elata	0.390
	SRR5643514	five period of Gastrodia elata	1.300
	SRR5643515	five period of Gastrodia elata	0.560
	SRR5643524	five period of Gastrodia elata	1.260
	SRR5643525	five period of Gastrodia elata	0.320
	SRR5643528	five period of Gastrodia elata	0.130
	SRR5643658	five period of Gastrodia elata	0.370
	SRR5643659	five period of Gastrodia elata	0.380
	SRR5643660	five period of Gastrodia elata	0.430
	SRR5643661	five period of Gastrodia elata	0.310
	SRR5643662	five period of Gastrodia elata	0.220
	SRR5643663	five period of Gastrodia elata	0.520
	SRR5643664	five period of Gastrodia elata	0.430
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.640
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.500
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.370
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.460
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.240
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.130
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.400
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.380
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.360
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.240
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.690
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.690
SRP279888	Gastro	Gastrodia elata tuber	2.56
	Juven	Juvenile tuber	3.90
	Mother_Gastro	Mother tuber of Gastrodia elata	1.83
	Mother_Juven	Mother tuber of Juvenile	4.18