Gene detail

Detail information of GWHGAAEX006450/evm.TU.scaffold_183.9

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2624	0	Triglyceride lipase-cholesterol esterase
nr	gi\|672135142\|ref\|XP_008791234.1\|	0	PREDICTED: uncharacterized protein LOC103708190 [Phoenix dactylifera]
Swissprot	tr\|Q67ZU1\|LIP2_ARATH	2.00E-20	Triacylglycerol lipase 2 (Precursor)
trEMBL	tr\|M0SEM2\|M0SEM2_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P14550_001}
TAIR	AT1G18460	0	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000182	539888	559856	-

Transcript Sequence
>GWHTAAEX006450 ACGTGTTAAATGAAAATGGAAAAAGGCCAAGACGGTCAATCGCACAGGCATGTACATCATTTTCTATCCACGTTTACGCTCAAGTTTCCGACTCTTTTCCCCATTTTCTTCAAACCTTTATACCTTCACCATTTGTTGCTGCTCATTCGGATTCTTCTGCACGAGGTTTTAGATTATGCTGCAGCGATTCGTCGACAACGTACTCGCCGTCACCAAGGAATCAGTGAAGACATTCACATATGAGTCTTTGAACAATATTGCAAGGTTGATTAATGGAGTGTCTGCACTTGTTTTGTCCGTACTACCAGGAAAGGCAACCATTTTAGAGGGAATAAATGGATGGGAACTCAGGCCTACATTTCGTGGACCTCGACTTCCTCGGTGGATGGAAAATGGTGTGTCCTCATTCAATGAATTCCTTCATGATCTTTCTCTGGATTCTGATTCCTCGAGTGTAGACTATTCTTCTGGGGAATATGATAATGATGGAAACATGCTTCCATCTTCTCCTTCTTCATATACGTCTCGTTTGTCTCATGCAAGCAATTTCTCTCGAGCTGACAAATGCTTAGCATGCATACGACTAATCATGCTTTTGATATCCTTGATTTTGTGGCCTTTGAAGCTTCTTTTAAAGATTTTTCTGTTGATTTATCATTCAGCTGGGTTCGGGAGAGGTAGAGAAATCTCCAGTGGCATACTTAGAAATTGGTTAATAAGTGTCACTTCTGTAAATAAGAAACCGGCGCATCTTAAAGACAATATTGTTCACCGCACAACAGATAGAAGGCGTGGGGTAATTGAGGATCTTCATCTAGCTATTGAAGTGTTTATTGAAGCAGTTTTTGATATTGTTCACAAGGCTTCAAATTTTCTTTTTTCGCCATCAAAAGTCTATCAAATACTTTCAGGAAGCTCATCTTATTTTGGAAGCCTTTGTAGAAATAGTTGTGATGGGAAAATTGATATGCCTGTTCCCACTTCTATTCTTGCTGATGCTGATCCAACTCCTACTGTAAGACAGACATCTTTCAGACGGTCTTTAAATACAGATGCGAGGACATGCAAGGATGTAATTACAGAACTTGGGTATCCGTATGAGGCCATTCGTGTGGTTACATCTGATGGATATGTTCTGCTTCTTGAGAGGATCCCCAGGCATGATTCACAGAAGGTTGTACTCCTTCAGCATGGAATACTGGATTCCTCGATGGGTTGGGTTTCTAATGGCGTGATTGGTTCTCCGGCATTTGCAGCCTATGATCAAGGCTATGATGTATTTCTTGGGAACCTGCGTGGGCTCGTTTCAAGGGAGCATGCCAACAAAAACATTTCATCTCGCTTGTATTGGAAATACTCGATCAATGAGCATGGAGCAAAAGACATACCCGCAATCACAGACAAGATACACGAAATCAAAACTGCAGAACTTGAGCTATCACCTAATCAAAATCCGGAGGATTTGTCCTATGAGCTTGGCGCAGTCTGCCACAGCCTTGGGGGAGCGATAATGCTGATGTACATCCTCATGCGTAGGTTAGAGGAGAAGCCCCATAGGTTATCAAGGATGATCTTGCTGTCCCCCGCTGGCTTTCACGAAGACTCAACGCTTGCATTTTCCTTGGCAGAACGAATAATACTGTTTGTCGGCCCGGTCCTCGCGCCCGTTGTTCCAGCCTTTTACATACCCACCCGTTTTTTCCGCATGATGCTGAACAAACTGGCTCGGGATTTCCACAACTACCCTGCGCTAGGTGGGCTTGTTCAGACACTAATGAGCTATGTTGTCGGTGGCGACAGCTCAAACTGGGTGGGTGTGCTGGGGCTGCCTCATTACAACATGGACGATATGCCAGGGGTTTCCCTCCGTGTCGCGATCCACTTGGCGCAGATAAAACGGTCTAAAAGGTTTATAATGTTTGATTACGGAAGCAGTGCTGCAAATATGGATGCTTACGGTTTTCCGGAGCCGTTGGATCTTGGCAAATATTATCACCTCATTGATGTACCTGTTGATCTTGTGGCGGGAAGGAAGGATAGAGTAATCAGGCCCTCAATGGTGAGGAAGCACTACGAACTTATGCAAAGGGCGGGCATCGAGGTTTCGTACAATGAGTTCGAGTACGCCCACCTCGACTTCACTTTTTCGCATAGGGAAGAGCTTCTGGCGTATGTTATGTCGCGCCTTCTGCTCGTCCGGCTGCCTCGGCTCGACGTGCGCGCTCAAAAAGAAGACGGGATCCAACCATCGAGGTAGGGTTAGCTTTGGGATCGGTCTTTGTACAGCATTGATGTAAAGCTTGTATCCGAATATCTGAGTATAGAAGGTAGAAATGTGTGGTGATATGTTTTTTCCCACCCTTTGATGTAAACACTTTATAAGAAGGATACTTTTCATTGTAAATTATAAAAACTCTTATAGAAAGAATGGAATAGAGTGGGTTTTTTTTTTCTTAAATTAAGTTCTAGCAGTATATTCTGTATTGTGCCATATATCAAGTTGAGTGTAAACTATTGCTTTCTAGTTTCTAGCGTGATAACTGAACAAGTGCTACTCTTGCTTGCTTCATTTTAATGATCATTTATTCTCCCTTGTTTGCATGTCGA

Network for GWHGAAEX006450

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04083.15	Abhydro_lipase	299	352	2.10E-13

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006629	Biological Process	lipid metabolic process

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	23.990
SRP064423	SRR2545915	Juvenile tuber	27.370
SRP108465	SRR5643513	five period of Gastrodia elata	22.230
	SRR5643514	five period of Gastrodia elata	25.740
	SRR5643515	five period of Gastrodia elata	27.880
	SRR5643524	five period of Gastrodia elata	27.810
	SRR5643525	five period of Gastrodia elata	59.880
	SRR5643528	five period of Gastrodia elata	63.420
	SRR5643658	five period of Gastrodia elata	77.250
	SRR5643659	five period of Gastrodia elata	22.380
	SRR5643660	five period of Gastrodia elata	22.490
	SRR5643661	five period of Gastrodia elata	23.680
	SRR5643662	five period of Gastrodia elata	27.220
	SRR5643663	five period of Gastrodia elata	25.530
	SRR5643664	five period of Gastrodia elata	23.550
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	20.020
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	19.270
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.290
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	22.210
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.450
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	27.230
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.070
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	22.460
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	23.560
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.690
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	26.470
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	26.470
SRP279888	Gastro	Gastrodia elata tuber	24.89
	Juven	Juvenile tuber	24.41
	Mother_Gastro	Mother tuber of Gastrodia elata	69.51
	Mother_Juven	Mother tuber of Juvenile	51.79