Detail information of GWHGAAEX006452/evm.TU.scaffold_183.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|225457050|ref|XP_002279713.1|2.90E-56PREDICTED: CASP-like protein 4A3 isoform X1 [Vitis vinifera]
Swissprottr|Q84WP5|CSPL8_ARATH2.00E-56CASP-like protein 4A3
trEMBLtr|M5WBA7|M5WBA7_PRUPE3.00E-54CASP-like protein {ECO:0000256|RuleBase:RU361233}
TAIRAT5G628203.00E-50Uncharacterised protein family (UPF0497)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000182849922851290+
Transcript Sequence

Network for GWHGAAEX006452

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04535.11DUF5881052391.40E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.470
SRR2545915Juvenile tuber2.690
SRP108465SRR5643513five period of Gastrodia elata4.460
SRR5643514five period of Gastrodia elata6.980
SRR5643515five period of Gastrodia elata6.650
SRR5643524five period of Gastrodia elata5.290
SRR5643525five period of Gastrodia elata51.370
SRR5643528five period of Gastrodia elata28.440
SRR5643658five period of Gastrodia elata45.990
SRR5643659five period of Gastrodia elata3.040
SRR5643660five period of Gastrodia elata1.440
SRR5643661five period of Gastrodia elata2.790
SRR5643662five period of Gastrodia elata2.600
SRR5643663five period of Gastrodia elata2.150
SRR5643664five period of Gastrodia elata2.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.370
SRR6049655Rhizomagastrodiae_C368-T10_good_15.760
SRR6049656Rhizomagastrodiae_C368-T07_good_15.700
SRR6049657Rhizomagastrodiae_C368-T07_good_14.170
SRR6049658Rhizomagastrodiae_C368-T04_good_14.780
SRR6049659Rhizomagastrodiae_C368-T04_good_13.920
SRR6049660Rhizomagastrodiae_C368-T01_good_14.780
SRR6049661Rhizomagastrodiae_C368-T04_good_15.280
SRR6049662Rhizomagastrodiae_C368-T01_good_19.540
SRR6049663Rhizomagastrodiae_C368-T01_good_14.670
SRR6049664Rhizomagastrodiae_C368-T10_good_15.910
SRR6049665Rhizomagastrodiae_C368-T10_good_15.910
SRP279888GastroGastrodia elata tuber 9.41
JuvenJuvenile tuber3.44
Mother_GastroMother tuber of Gastrodia elata 18.67
Mother_JuvenMother tuber of Juvenile 3.85