Detail information of GWHGAAEX006456/evm.TU.scaffold_183.16
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|71907234|ref|YP_284821.1| | 2.00E-24 | protein kinase:GAF [Dechloromonas aromatica RCB] |
| nr | gi|672135046|ref|XP_008791183.1| | 0 | PREDICTED: cysteine-rich receptor-like protein kinase 2 [Phoenix dactylifera] |
| Swissprot | tr|Q9CAL3|CRK2_ARATH | 0 | Cysteine-rich receptor-like protein kinase 2 (Precursor) |
| trEMBL | tr|D7SHN8|D7SHN8_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI14998.3} |
| TAIR | AT1G70520 | 0 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000182 | 1173495 | 1194479 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006456
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01657.16 | Stress-antifung | 49 | 127 | 9.70E-11 |
| PF01657.16 | Stress-antifung | 143 | 236 | 2.50E-13 |
| PF00069.24 | Pkinase | 325 | 590 | 1.20E-49 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_DLSV |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 31.920 |
| SRR2545915 | Juvenile tuber | 41.090 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 16.340 |
| SRR5643514 | five period of Gastrodia elata | 17.080 | |
| SRR5643515 | five period of Gastrodia elata | 21.490 | |
| SRR5643524 | five period of Gastrodia elata | 16.770 | |
| SRR5643525 | five period of Gastrodia elata | 22.940 | |
| SRR5643528 | five period of Gastrodia elata | 47.480 | |
| SRR5643658 | five period of Gastrodia elata | 29.830 | |
| SRR5643659 | five period of Gastrodia elata | 22.250 | |
| SRR5643660 | five period of Gastrodia elata | 21.900 | |
| SRR5643661 | five period of Gastrodia elata | 21.370 | |
| SRR5643662 | five period of Gastrodia elata | 25.920 | |
| SRR5643663 | five period of Gastrodia elata | 25.820 | |
| SRR5643664 | five period of Gastrodia elata | 26.380 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 16.870 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 10.390 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.460 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 16.600 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 16.260 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.950 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.130 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 17.170 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.720 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 16.020 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 15.390 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 15.390 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 38.26 |
| Juven | Juvenile tuber | 17.89 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 38.49 | |
| Mother_Juven | Mother tuber of Juvenile | 41.49 |