Gene detail

Detail information of GWHGAAEX006464/evm.TU.scaffold_184.7

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|389879408\|ref\|YP_006372973.1\|	6.00E-23	lactate dehydrogenase-like protien [Tistrella mobilis KA081020-065]
KOG	KOG0067	0	Transcription factor CtBP
nr	gi\|672170995\|ref\|XP_008805571.1\|	0	PREDICTED: C-terminal binding protein AN-like [Phoenix dactylifera]
Swissprot	tr\|O23702\|CTBP_ARATH	0	C-terminal binding protein AN
trEMBL	tr\|F6I647\|F6I647_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB62443.1}
TAIR	AT1G01510	0	NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000180	277933	311347	-

Transcript Sequence
>GWHTAAEX006464 AAAAAATTGCACAAGATGTGTAGAGCATAAAGTGAAGCTAAATTTCAAATTAACTGAAAGCTACTCTCTTGTTTGCTTAAATGCTTCTCCCTCTCATCGTCCGCCTCCCATGACTGGCGTCGTCTCCCAATTCTACAGTTCTCAGCATGCTAGAAAACACGAGAATGATGCGATCGGCGGCGTAATCAAACCCTAAGAGAGCAATAAGCTAATTTTATGAGGAATAGCGAGAATAGCCGGAAGATTCAGCGTGTAGCCGGCGCTCATTCACCGGTCTTTCAGACCCACATGGCATCTTCCCTCCCTCTAGTTGTTTCCCTCAATTGTCTCGAGGACTCTTCATTTGAACTTGAATCTCTCGTTGGCTTAGCTTCTGTAGAGCACGTCAGTCTATCGCACATCACGGATGGCCGGATCGAATCAGCTGCCGCCGTTCTCCTCCACTCACTTGCATATCTTCCACGCGCCGCCCAACGCCGACTCCAACCATGGCAGCTTATTCTCTGCCTCGGCTCCACCGATCGTTCGGCTGACTCTGCCCTTGCCGCCGATCTCGGTCTCCGCCTGGTTCACGTCGATGTCAATCGAGCTGAGGAGATTGCAGACACCGTTATGGCTCTCTTTCTTGCCCTCCTTCGACGCACAAACCTCCTTTCGCGTCATTCTTCATCATCGTCAGCGGCTTCTGGCTGGTTCGGGTCAATCCAGCCGCTGTGCCGTGGCATGCGGAGATGTCGGGGACTTGTGCTGGGAATCATTGGAAGCTCTGCCTCTGCACGATCCCTGGCCACCAGAAGCCTAGCATTCAGGATGAGTGTACTTTATGTTGATGTAAATGAGAAAAACTATGCAAAGGGAAAAGGAAGATTTCAGCAAAGTTCTATAACATTTCCTGCTGCTGCTCGGAAAATGGATACTCTCAATGATTTATTAGCTGCAAGTGATCTCATTTCACTTCATTGTGAATTATCTGATGAGCCAATACAGATTTTAGATGCTGAAAGCCTGCAGCATATAAAGCCCGGAGCTTTTATCGTTAATACCAGCAACGCTCATCTAATAGATGATTGTGCATTAAAGCAGCTTTTGATAGATGGCACTATAGCGGGCTGTGCATTGGATGGTGCTGAAGGACCACAATGGATGGAAGCATGGGTTAGAGAGATGCCAAATGTAATAATTCTTCCAAAGAGTGCGGACTATAGTGAAGAAGTTTGGATGGAAATTAGGGAGAAAACTATCTCTATGCTTCAAGCTTTCTTTCTTGATAGCAAGTTTCCAAATAATGATGTATCAGATGAAGGGGAAGAAAACTGTGAGATAGCATGCATAAATGATCAAATCGAAAAGAAGATAAAAGATAATTCATCTCAAATTTTTGATACAGAGCAGAAGTCAGACTCAAATCAATTTTGCAACAGATCTAATCAGAAGCAGCCTATCAGAAACTCAACAGAATCTCAAGTTTCAGACCTATCTCAAAATACTGTTCCAAGGTCTGGTGGACAACACAGTAGATCCGGCAAGAAGACCAAGAAGAGGCGTGCTCGTCAGAGAGGCCAGCCGAAATCGCATGATATTTCTGGGGTAGAAGGAAGCTATAGCTCTCAGCAAGAAGATGATACAGCTATTAGTGGTATGGAGCAAAGTTCCAGATTTACATCTCCAGAGGATTCTAAAAGCAAGCAAATTTGTCTTTTTGAATCAAATATGGATCCATCTTCTCAGAAACTAGAAATTGCAAGTGGGGCTCTAAATAGGAAATGCGTTGAACTTCTGAAAGATGGTTTTGTTATTACTTTACATGCTATAGGGCGCCCTGGCTTTCATGTGTCAAGACAAAGAGTACCGGGTGGTGGATGGTTTCTAGATACATTTTCCAATGTATCCAAAAGGGATCCTGCTGCTCAATTCCTTGTTTCTTTTAAAAGCAAGGATGTTCTTGGGTTGCGATCATTCTCAGCTGGTGGAAAACTGTTACAGATCAATCGAAGAATGGAGTTTGTGTTTGCTAGTTACAACTTTGATGTGTGGGAGAGTTGGATGCTAGAAGGCTCTTTGCTTGAAGACTGCCGCCTCATCAATTGCAGAAATCCATCGGGCGTGTTGGATGTTCACATGGAGATTGTTGCGACTGTTGGTGAAGAGGATGGGGTTTCAAGATGGCTGGATTGATGATTATATATCATAACATAGAACTTCTTATATTCCAAGCATAAGGATTAAAGCAGCTGATTTTCGTTGCTGTCCCTTTAAATGTTGTGATGGATCCATTTCTCAAAGTAAAACCTTAAAAATAGTTTTGGATAGTGCTATTTGTTAATGCCTGCACTTCTTATTGTGGAACTGTTTGGCATGAACGCCTGGATGTTGAACTATGCACCTTCATTGCAAGCATTGCATTCTCACTATTTTATCTCGCGTTTTACTTTTTGCACGAGCTTTGTTTCTCCTTTTAAGCTTTCTTTCCGATGTTAAAGTGTTACAAATAGCTACCATTGAGGCTGCTTTGCTGCATCGATTGGTATTCATGAGTGAAAATTGCCAATTAAATTCAATTGTTATAATGAAAATTTACAGATTTATTTTCCTTGTATTTGCTAATATGAAGCTCTTCTTTTAGCCAC

Network for GWHGAAEX006464

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02826.18	2-Hacid_dh_C	133	324	3.00E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0051287	Molecular Function	NAD binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	92.380
SRP064423	SRR2545915	Juvenile tuber	72.710
SRP108465	SRR5643513	five period of Gastrodia elata	45.280
	SRR5643514	five period of Gastrodia elata	45.060
	SRR5643515	five period of Gastrodia elata	38.100
	SRR5643524	five period of Gastrodia elata	44.700
	SRR5643525	five period of Gastrodia elata	26.610
	SRR5643528	five period of Gastrodia elata	32.280
	SRR5643658	five period of Gastrodia elata	32.560
	SRR5643659	five period of Gastrodia elata	53.480
	SRR5643660	five period of Gastrodia elata	62.810
	SRR5643661	five period of Gastrodia elata	62.900
	SRR5643662	five period of Gastrodia elata	47.880
	SRR5643663	five period of Gastrodia elata	46.390
	SRR5643664	five period of Gastrodia elata	56.380
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	59.030
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	56.250
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	52.210
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	61.870
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	50.810
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	54.850
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	58.820
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	59.080
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	55.100
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	55.700
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	54.960
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	54.960
SRP279888	Gastro	Gastrodia elata tuber	35.98
	Juven	Juvenile tuber	71.16
	Mother_Gastro	Mother tuber of Gastrodia elata	24.22
	Mother_Juven	Mother tuber of Juvenile	40.87