Detail information of GWHGAAEX006491/evm.TU.scaffold_185.22
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|194333519|ref|YP_002015379.1| | 1.00E-52 | NAD-dependent epimerase/dehydratase [Prosthecochloris aestuarii DSM 271] |
| KOG | KOG1502 | 6.00E-116 | Flavonol reductase/cinnamoyl-CoA reductase |
| nr | gi|743821930|ref|XP_010932167.1| | 8.55E-164 | PREDICTED: tetraketide alpha-pyrone reductase 1 [Elaeis guineensis] |
| Swissprot | tr|Q500U8|TKPR1_ARATH | 2.00E-149 | Tetraketide alpha-pyrone reductase 1 |
| trEMBL | tr|M0U8F2|M0U8F2_MUSAM | 4.00E-159 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP11930_001} |
| TAIR | AT4G35420 | 6.00E-116 | dihydroflavonol 4-reductase-like1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000189 | 831497 | 858412 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006491
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01370.20 | Epimerase | 14 | 249 | 3.30E-25 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0050662 | Molecular Function | coenzyme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 56.890 |
| SRR5643514 | five period of Gastrodia elata | 60.190 | |
| SRR5643515 | five period of Gastrodia elata | 54.590 | |
| SRR5643524 | five period of Gastrodia elata | 56.010 | |
| SRR5643525 | five period of Gastrodia elata | 74.960 | |
| SRR5643528 | five period of Gastrodia elata | 71.490 | |
| SRR5643658 | five period of Gastrodia elata | 88.600 | |
| SRR5643659 | five period of Gastrodia elata | 108.830 | |
| SRR5643660 | five period of Gastrodia elata | 130.520 | |
| SRR5643661 | five period of Gastrodia elata | 102.340 | |
| SRR5643662 | five period of Gastrodia elata | 83.580 | |
| SRR5643663 | five period of Gastrodia elata | 125.450 | |
| SRR5643664 | five period of Gastrodia elata | 100.670 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 45.470 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 54.380 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 30.440 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 42.300 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.120 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 17.810 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.090 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.240 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.900 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 31.740 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 31.740 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 51.93 |
| Juven | Juvenile tuber | 139.14 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 96.87 | |
| Mother_Juven | Mother tuber of Juvenile | 145.19 |