Detail information of GWHGAAEX006495/evm.TU.scaffold_185.26
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|262199486|ref|YP_003270695.1| | 2.00E-23 | serine/threonine protein kinase [Haliangium ochraceum DSM 14365] |
| nr | gi|695081576|ref|XP_009388315.1| | 0 | PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9FG33|LRKS5_ARATH | 2.00E-130 | Probable L-type lectin-domain containing receptor kinase S.5 (Precursor) |
| trEMBL | tr|Q9XIS3|Q9XIS3_POPNI | 0 | Lectin-like protein kinase {ECO:0000313|EMBL:BAA82556.1} |
| TAIR | AT5G06740 | 6.00E-130 | Concanavalin A-like lectin protein kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000189 | 1018680 | 1022065 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006495
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00139.18 | Lectin_legB | 25 | 269 | 3.90E-61 |
| PF07714.16 | Pkinase_Tyr | 347 | 620 | 5.50E-44 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_L-LEC |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0030246 | Molecular Function | carbohydrate binding |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 28.350 |
| SRR2545915 | Juvenile tuber | 14.660 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 43.880 |
| SRR5643514 | five period of Gastrodia elata | 22.400 | |
| SRR5643515 | five period of Gastrodia elata | 34.310 | |
| SRR5643524 | five period of Gastrodia elata | 24.010 | |
| SRR5643525 | five period of Gastrodia elata | 271.040 | |
| SRR5643528 | five period of Gastrodia elata | 247.080 | |
| SRR5643658 | five period of Gastrodia elata | 214.960 | |
| SRR5643659 | five period of Gastrodia elata | 64.480 | |
| SRR5643660 | five period of Gastrodia elata | 56.770 | |
| SRR5643661 | five period of Gastrodia elata | 60.210 | |
| SRR5643662 | five period of Gastrodia elata | 74.600 | |
| SRR5643663 | five period of Gastrodia elata | 51.280 | |
| SRR5643664 | five period of Gastrodia elata | 99.650 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 73.170 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 70.100 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 62.390 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 88.730 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 90.740 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 104.330 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 70.650 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 75.980 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 42.320 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 51.730 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 58.810 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 58.810 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 69.13 |
| Juven | Juvenile tuber | 37.41 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 316.04 | |
| Mother_Juven | Mother tuber of Juvenile | 138.47 |