Detail information of GWHGAAEX006497/evm.TU.scaffold_185.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|319955999|ref|YP_004167262.1|7.00E-54hypothetical protein Nitsa_0241 [Nitratifractor salsuginis DSM 16511]
KOGKOG32672.00E-73Uncharacterized conserved protein
nrgi|743821954|ref|XP_010932172.1|1.51E-87PREDICTED: UPF0047 protein C4A8.02c [Elaeis guineensis]
trEMBLtr|A0A061FMV1|A0A061FMV1_THECC2.00E-84Uncharacterized protein isoform 1 {ECO:0000313|EMBL:EOY15844.1}
TAIRAT1G21060_22.00E-73Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018910359251107179+
Transcript Sequence

Network for GWHGAAEX006497

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01894.16UPF0047741921.90E-37
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms108.460
SRR2545915Juvenile tuber76.700
SRP108465SRR5643513five period of Gastrodia elata38.900
SRR5643514five period of Gastrodia elata31.720
SRR5643515five period of Gastrodia elata31.820
SRR5643524five period of Gastrodia elata26.600
SRR5643525five period of Gastrodia elata39.040
SRR5643528five period of Gastrodia elata30.520
SRR5643658five period of Gastrodia elata26.950
SRR5643659five period of Gastrodia elata54.260
SRR5643660five period of Gastrodia elata62.930
SRR5643661five period of Gastrodia elata47.640
SRR5643662five period of Gastrodia elata64.120
SRR5643663five period of Gastrodia elata58.630
SRR5643664five period of Gastrodia elata80.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.260
SRR6049655Rhizomagastrodiae_C368-T10_good_136.600
SRR6049656Rhizomagastrodiae_C368-T07_good_144.050
SRR6049657Rhizomagastrodiae_C368-T07_good_169.220
SRR6049658Rhizomagastrodiae_C368-T04_good_161.970
SRR6049659Rhizomagastrodiae_C368-T04_good_172.780
SRR6049660Rhizomagastrodiae_C368-T01_good_151.700
SRR6049661Rhizomagastrodiae_C368-T04_good_151.870
SRR6049662Rhizomagastrodiae_C368-T01_good_138.790
SRR6049663Rhizomagastrodiae_C368-T01_good_140.190
SRR6049664Rhizomagastrodiae_C368-T10_good_146.350
SRR6049665Rhizomagastrodiae_C368-T10_good_146.350
SRP279888GastroGastrodia elata tuber 97.10
JuvenJuvenile tuber43.89
Mother_GastroMother tuber of Gastrodia elata 39.03
Mother_JuvenMother tuber of Juvenile 44.01