Gene detail

Detail information of GWHGAAEX006503/evm.TU.scaffold_185.38

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743805602\|ref\|XP_010927486.1\|	0	PREDICTED: LOW QUALITY PROTEIN: restin homolog [Elaeis guineensis]
trEMBL	tr\|M0S3P4\|M0S3P4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P27870_001}
TAIR	AT5G25070	6.00E-110	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000189	1476998	1497366	-

Transcript Sequence
>GWHTAAEX006503 ATTCTATACCACATGCAACCAAATAGAAGAGTAATTTGTGGGTGAATTAAATTAGAGAGTATGATGCTCTCTTTTTTTTGTATTTTCTGGCACGGCTTCTTCTCTAGCCATGGCCTCGGATGGCTCGCTCTTTGAGGGTATGGTCCTCTTCTCCCCCTCCGACTTACTCCTGTCGCCCTCTCTCCCTGAAAGGGATCCGTCTCCAGTTCATCTTCCTCCTTCTTCGCCCCATTCCAAATCTCAACCCCTCGACGAGGATCTGTTTTCAGATCTCTCCCTCGAAACCCCGATCGAACTCATAAAAGATCCTCGTATTGAAATTCCATCCCCTTCTCCGGCCCTTCCATCTCGCCAGATCTCCCGCAAGAAGAAGCGTGCCCTCCGTATCGGATACGGCCGAGAAGCAATCGATGCGACGCCGGCGGAAACCGCCGACAATCATTCTCATTCAACTGAGGACGCTGTTCTTTCTTTTAAATCCGTCTTTAATCCATCAACTACGAGCTTTCACGAAGATTTTCCAAACGGATCCGGACATGAAAATGTGGTAGCTTCAGAAGTCGTAGTAGTAGAATCTGTAATTAGCACGGCCGATGGCGATGGGTTATCAACTTCACGACGTAGTGATTCTGAAGGCGGCGATGTGTTTTTTCCTTCTACTTTAGAGGCTTCTGAGAAAGGTGACAGCTTGGAATTATTGAAGGAGAGATTGAGTCTTCTCAGGTCTAAGATTTCCACAAAGCTCGAGCAGATTAGAGAGATGGCAACTTCGGTGTATGGTGAGAGAAAGGAACTAGAGAGGAGGAAAAGGAAAGCCAGGCAAGATGTCAACCAGGCTTCGGTGTTGTATAAAGATTTAGAGAAGCAGCTCGAAGTGGCTTGTGAGGCAGAGGATTTTGAGAGTGCTGAGAGAATCAGCGAGTATCTTGGCTTAGCAGAAAAGGAGAAGGATAGGTTTCTGAGTTCTTTGAGGGAGAGCGAACTGAACTGCGATTATATTGATTCAAGGATGCAGGAGGTACTCAAATTGCAGATAGCCGCTGAGGAAGAGGGAATAGATCTTCTTGAACTGTTTGCCAAGGATGCTACGGATCGTGCGGATTTAATCCGTAGAAACGCAGAGAAAGAATCTTCCAAAGACTTGGAGGACTGGCAATCATCAATGGAGCTGCTAGAAATGAGCAAGCTTGAGATGAATATTGAAGTAGAACTTGTATCAGATGCACGCTCGGCATTGGATGGTTCGATTGAGGATTTAGTTAAATATGACAGAGAGGAGGTTGAAAAGCTGAAAACTAAACAGGTTATTTTGTCAAAGGAGTTGGATGAGCTTTTGAGCTTAGTTAGATTGAAGGAAGCCGAAATTATTGAGAATGAATCTCAGATTCATGAAGCCGAGCAAAGAATTTCTATAGTTTCATCTAGGTTTCAGGAGTCAAGTTCAAGTGTTGGATTGAAGCATGACAGTCTCAAGTCAGCCATGTCCATGATCAAGTCAGAGCTTGATTTATTGTCTTTAAAAAAGAATGAAATCGATGAATTTATTTCTCTAGAAGAGCAAAGGAGTTTAAATCTTAGGGAGCTTGCCAGTGCTGCTTTGGATGAAGCAAAATTCTGTCGGGGTTTGGTTGGGTTGAGAAAGGAATTGGCGTCATCTATCTTAAAATCCCAGGAAGAAAAATTGCAGTTAGTGAAGACAGAAGAGAAAATTCTGGAGGAAATTCAGGTGCTCCGACAACAAATTTCCAGTGCAAGAACAATCTTACAGGAACTTTCTTCCTCAAGACTAAGCATTCAGCAAGACATCGATTTATTTAAGCAGCGGATAGCTTTTGTCGATAAAAGAGGGCCTGAGCTTGAGGCCGAGAAGAAAGTTGCCGCTGCTGCACGAAATTTCAAAGAAGCAGGGCGGATCGCTGCTGAGGCAAAAGCACTGAACTCTGAGAAGGAGGGAGTGCAGAATCAAATGGATCAAGCCGTTCTAAACCTTGAAAAATTAGATGAGGATATCAAAAGAAACATTAGCATGATGCAGGAAAGCGAGGAGCTTGTCTTGCTGAAGGAAAAGGAGGCAGCAGTTGCAAGTTTTACGAGGCTCCGATTGATTTCCGCTGCTGCAAAATCTGAAAGCTCGGCAGCTCTCGAGTTAGGTGACTCAGAAGAGGGTGAATTTTTATCTAGAGAGGCTGAGGTTGCTGAAGAAAGAGCCAAGGAACTTCAAGAAGCCTATAGCATTGATCCGGATGACCATGAAAACACTGGCAATTACTTTTTCCCTGTTGCACTCATCCCTAAATTTTCAGGTCACAGTATTGAAGAAATGGCTGCGGCTTTAAAGAAAAGTTCTTGTGACCTTTAAATGATGGGGGATCATTCATTCGAGAGAAAAAGGTGGTATTTTTGTAATGAGCTTGTTGTATGATGATGTAGATATCGATGTACAATCAGCTGCCTCATTGTATGACAGAAGATGAGGAAAGCTACATTCCATCCTTGTTTTAATTCTCTTTTTTATCTGCATTTTTTTGCAATGTTGATTCTGTAATTGTTATGAACGAATAATTAAATCCAATCCACTTAATGCTTCTAAAAGTTTGGGTTTTTTGATAAACTTGTATTAGAAATATCAGTTTGAAAATTGTTGTTGTCATTAAGTTCATACATCTATTCTTTCATTATATCATATTGTCC

Network for GWHGAAEX006503

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	25.880
SRP064423	SRR2545915	Juvenile tuber	26.890
SRP108465	SRR5643513	five period of Gastrodia elata	32.280
	SRR5643514	five period of Gastrodia elata	29.300
	SRR5643515	five period of Gastrodia elata	30.230
	SRR5643524	five period of Gastrodia elata	29.770
	SRR5643525	five period of Gastrodia elata	30.090
	SRR5643528	five period of Gastrodia elata	27.330
	SRR5643658	five period of Gastrodia elata	26.550
	SRR5643659	five period of Gastrodia elata	28.660
	SRR5643660	five period of Gastrodia elata	25.610
	SRR5643661	five period of Gastrodia elata	30.680
	SRR5643662	five period of Gastrodia elata	30.260
	SRR5643663	five period of Gastrodia elata	29.000
	SRR5643664	five period of Gastrodia elata	27.410
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	29.650
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	30.770
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	31.950
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	27.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	27.380
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	29.900
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	31.460
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	30.440
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	33.870
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	30.120
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	31.430
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	31.430
SRP279888	Gastro	Gastrodia elata tuber	34.25
	Juven	Juvenile tuber	40.54
	Mother_Gastro	Mother tuber of Gastrodia elata	32.89
	Mother_Juven	Mother tuber of Juvenile	45.07