Gene detail

Detail information of GWHGAAEX006508/evm.TU.scaffold_185.46

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG4280	Kinesin-like protein
nr	gi\|743775048\|ref\|XP_010917897.1\|	PREDICTED: phragmoplast orienting kinesin 2 [Elaeis guineensis]
Swissprot	tr\|Q27IK6\|POK2_ARATH	Phragmoplast orienting kinesin 2
trEMBL	tr\|M0T9G6\|M0T9G6_MUSAM	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT3G44050	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000189	1719060	1740504	-

Transcript Sequence
>GWHTAAEX006508 ATCTATCATCCACCGTTGATAAAAATCATTCCTCGTGACGCACGCCGATCAGTACTAGTAGAAACGCCATAGGCCAAAAGGCGAATTTGAATGCACTCCAGCCTCCTTCTCCCCACTTTCCTCCTCATTCCGCTCAAAAACCCTAATTAAATCTCATTCGAGAGTACAGAAGTCGCTTTTGGTCGTCAGTTCAGTTGATCGGCATGCCGACGATCACTGAACCAGCTAGTGCCACTCGTTGGAGTTCAAAATCTCAAGAATCCTTCAGCGAATTCTCAGAGGCTGAGCCGAGCGGTGTTCACGGAGTCGGCGAAGCTGGGGTTGGTTGGGCTCAGGGTTTTGAGCTGCGAGAGGATCCATCTTTCTGGAAGGATCATAACGTCCAGGTTATAATTCGTCTCCGACCTCTCAACAATTCTGAGATTTCGCTTCAAGGACAAAAAAGATGTGTTCGTCAAGATACTTGTCAAACTCTTACATGGATTGGACATCCAGAGTCTAGATTTACTTTTGATCTTGTTGCTGATGAATATGTCAGCCAGGAAAGGCTGTTTAAAGTAGCTGGTGTGCCTATGGTTGAAAATTGTATGGCAGGATACAATAGCTGCATATTTGCATATGGCCAAACTGGGAGTGGAAAAACTCACACTATGCTAGGTGATATAGAAGGAATTCAAAGAAGCAGTACTAACTGTGGAATGACACCCCGGGTTTTTGAATATCTATTTTCTAGGATACATAAGGAAAGGGAGTCTCAAAGTGATCAAAGACTCCATTTCACATGCAAATGCTCATTTCTTGAAATATACAATGAGCAGATTTTAGATCTGTTGGATCCTTCTTCCATAAATTTACAGATAAGGGAAGATGCAAGAAGAGGAGTTTATGTTGAAAATCTCAAGGAATATGAAGTCTCAAATTCTAGAGATGTTATTCAACAGCTTATTCAGGGAGCAGCTAATAGGAAGGTGGCTGCTACAAATATGAATCATGCTAGCAGCCGTTCTCATAGTGTTTTTACTTGTGTCATTGAAAGAAAGTGGGAATCCCAAGGTGTCACACATCACAGATTTGCTAGGCTAAATCTAGTTGATCTTGCCGGATCGGAGAGGCAAAAAACTTCAGGGGCTGAAGGTGATCGACTTAAAGAAGCTACTAACATCAACAAGTCACTTTCAACACTAGGGCTTGTTATTATGAACCTCGTTAGCAGCTTGGGTAAGAGACAACTACATGTTCCTTATCGAGACTCAAAGCTTACATTTCTTTTGCAGGATTCTCTTGGCGGAAACTCTAAGACTATGATAATTGCAAATATAAGTCCTTCCAATTGTTGTGCTCTGGAAACACTTAGCACATTGAAATTTGCACAACGTGCCAAGTTTATAAGAAATAATGCTATTGTGAATGAGGAAGCTTCAGAAGATGTTCTTACACTGCGATTACAAATTCAACAGCTCAAGAAAGAAGTGAATCTTTTGAGGGGCTTGACTAATGGTGGACCTGCTAAGTTTGAAAGTGATATGTCTACTCAGGGATCTCCTGGAATTTTGAAATGGAATGGAGATCAATCAGCATTCAGTCCACTAACCTTTGATAAAAGATTATCACCAAGAAAAGAGGATGAAATTGCTTTAGTAGCAGCTCTAAGGAGAATCCATGACAAAGAAGAAGAAATGAAAGCACTGGAGGCCGAGAGAGAGACTGCAGATCAGTTGATTATTCACCGAACAGAAGAGGTCAGAAACTTAAAATTAAGGCTTCGATTTCGTGAAGATGCAATCAAGAGGTTGGAGGGAGTTGCTTCTTCAAAACTGTCTCCTGAAGCACATATTTTGCAAGAAAAGGAAGAACTTTTGAAAGAACTAGAAGTTCTCCGCAATCAGGCTGACCGTAATTCAGAAGTGACGAGATTTGCAATGGAGAATATGCAGCTACGTGAAGAACTTAGAAAATTAAAGGCATTTGTTGAAAATGGAGAACGGGAAATAATGAATGAACAGATTGCTGTCTTACAGGATAAGCTGCTGGAAGCTTTGGACTGGAAACTCATGCATGAGAAGAACTCAGAGAATCGTTCTTTATTCTCGTGGGATTCTTCTGTGAACGAGGAAAATGAATTCCTACGTTTAGAGGCTATTCAGAGGCAAAGGGAAGCAGAAGTACTTCGAAAGAATCTGGCTGTTTGTCTAGAAGCTAGAGAAATCCTTGAGAGGCGTGTGGAGGAGTTGACATCACAACTTGAAGAGCTAAAGAATGCTGAAAATACAAGTGAGGAAAGTCATAGACCTCAGATCCTACATACTGCATCAGACGATCAAATAGAGCTTAAAACACTTGTAGATGCAATTGCAGCTGCGAGTCAGCTTGAAGCGGAAACTCGTGAAACAGCCATCACATTGGCTAGAGAGAATAATGAACTACACATAAAGCTTAAATCTTTGATTGAAGATAAGAGTAAGCCGATTGAGCTGTATGAAAGTTCTGCCAAAGCCAGAGAAAATGAAACAACGTATTCTCATTCAGTTGAGAATATGAGGGAACTACATGAGAATTTGGCAGATTTTCATGAGAACCGGCCACAGAACAGAGTAGAAGACAAGAAAGTTGAGCAATTGGAGCACCAACTCAATGAGATGCTTGAAGAAAATGAGAAGTTGATGAGCTTATATGAGAAAGCAATGCAGGAGAGGGATCATTTCAAAAGGACTTTCGCTTTTTATGAAGCTGCTAGGGTTGAAATAAAAGAAGAGATAAACTGTGCTGAAAAACTTGTTGAAATGGTTGAAGAATGTGGAGATCATGTATTATTAAAAGAAATACTGAACAAAGTAAGGAATAAGCTGAATCTGGTTGAGGATAACCTTGCACCTACTGTTGAAGTTATCAAGTTTTCTAGTTTACTTCAGAAAGTAGCAAATGAAGTAGAAGCCCTTTATTATAGGTTTGAATATGTGAATCAAAATGTTGTGCTTATGCAGCAGGAGATTACAGAGCTTGGTTCACCCTTGCCCAAACTACAGGACAGAAAGGCGGCCTTAGATGAAGAAATTTTGGTTATGAAAAATGCTTTTCATACTTTTTCATCCAAGTTTGATTACTTGGAAGAAAAAGATCTTGAGGATAACTTTCGATATCATTCATGCTTGGCATCTTTAGATCAAAAGAAGGCTGAACTTACACATCTTTGTGGACTCAAGAATGAAACTGAAAGTTCATCTACAAAATTAAAGCAATCTGAAGTTAAGTATAGAAGTAACATTGGACGTTTGAGGACTCAACTCCAAGCTGCAATGGCTCAAAGAAAGGAAACTGAAAAGGTGTTGCTTTCGATTGATAATTTTTTCAGAAACAGCCATTCGGAACCAAAGGACCTTGACATTGGCAAAGCAACTGACCTGCTCAAGTCCGAGGAGGAGAGAAGTCAAATCGCCATGGAGATAAAGAAGCTCAAGGAGAAGCTAATGTTTGCACGCAAGGAAATGGCAAAATTGATCCCGAAATCAGATTCTCTTGATGCTCAGATCAAAAAAGTTGAGGCTGATATTACAAGTGAATCAGCCTTATTACAAGAAGCAGAACTTTCATTGCAGAGAGTTTCTGGAGAGAAGCAGGTGCTCTGCAAAATGATAGAGGATGGGATGATTGAGATGGGAAGGATTTTAGTTGAATATCAGGAGTGTATCTTTAAGGTGGATCTAATAAAAGGCGAAATTCTTCTATGCGATGATGAGCTGGCACGGGAAATGAAGAAAATGAATGATGTGAAGAGTAGGCACAGAGCAGCTGTAGACAATCTCAGCAATCTACTGAAGGATAACAGGCACAGTATGGTGAAGATCTGTAGTGATATTTGTTCTAAATTCTCTTTGGAAGATGTTGAAAGGCAATTTGGGTTAGCACTAAGGACACTAGGTGAAGCTAAATTGCTCTTATTCGGGGGCATGGACAGATAGGTTTGTTTTTGTTCTTCGAGTAA

Network for GWHGAAEX006508

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	65	394	1.20E-109

Protein Sequence

>GWHPAAEX006508
MPTITEPASATRWSSKSQESFSEFSEAEPSGVHGVGEAGVGWAQGFELREDPSFWKDHNVQVIIRLRPLNNSEISLQGQKRCVRQDTCQTLTWIGHPESRFTFDLVADEYVSQERLFKVAGVPMVENCMAGYNSCIFAYGQTGSGKTHTMLGDIEGIQRSSTNCGMTPRVFEYLFSRIHKERESQSDQRLHFTCKCSFLEIYNEQILDLLDPSSINLQIREDARRGVYVENLKEYEVSNSRDVIQQLIQGAANRKVAATNMNHASSRSHSVFTCVIERKWESQGVTHHRFARLNLVDLAGSERQKTSGAEGDRLKEATNINKSLSTLGLVIMNLVSSLGKRQLHVPYRDSKLTFLLQDSLGGNSKTMIIANISPSNCCALETLSTLKFAQRAKFIRNNAIVNEEASEDVLTLRLQIQQLKKEVNLLRGLTNGGPAKFESDMSTQGSPGILKWNGDQSAFSPLTFDKRLSPRKEDEIALVAALRRIHDKEEEMKALEAERETADQLIIHRTEEVRNLKLRLRFREDAIKRLEGVASSKLSPEAHILQEKEELLKELEVLRNQADRNSEVTRFAMENMQLREELRKLKAFVENGEREIMNEQIAVLQDKLLEALDWKLMHEKNSENRSLFSWDSSVNEENEFLRLEAIQRQREAEVLRKNLAVCLEAREILERRVEELTSQLEELKNAENTSEESHRPQILHTASDDQIELKTLVDAIAAASQLEAETRETAITLARENNELHIKLKSLIEDKSKPIELYESSAKARENETTYSHSVENMRELHENLADFHENRPQNRVEDKKVEQLEHQLNEMLEENEKLMSLYEKAMQERDHFKRTFAFYEAARVEIKEEINCAEKLVEMVEECGDHVLLKEILNKVRNKLNLVEDNLAPTVEVIKFSSLLQKVANEVEALYYRFEYVNQNVVLMQQEITELGSPLPKLQDRKAALDEEILVMKNAFHTFSSKFDYLEEKDLEDNFRYHSCLASLDQKKAELTHLCGLKNETESSSTKLKQSEVKYRSNIGRLRTQLQAAMAQRKETEKVLLSIDNFFRNSHSEPKDLDIGKATDLLKSEEERSQIAMEIKKLKEKLMFARKEMAKLIPKSDSLDAQIKKVEADITSESALLQEAELSLQRVSGEKQVLCKMIEDGMIEMGRILVEYQECIFKVDLIKGEILLCDDELAREMKKMNDVKSRHRAAVDNLSNLLKDNRHSMVKICSDICSKFSLEDVERQFGLALRTLGEAKLLLFGGMDR

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0008017	Molecular Function	microtubule binding
GO:0005524	Molecular Function	ATP binding
GO:0003777	Molecular Function	microtubule motor activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.270
SRP064423	SRR2545915	Juvenile tuber	2.890
SRP108465	SRR5643513	five period of Gastrodia elata	10.740
	SRR5643514	five period of Gastrodia elata	10.040
	SRR5643515	five period of Gastrodia elata	10.710
	SRR5643524	five period of Gastrodia elata	10.620
	SRR5643525	five period of Gastrodia elata	4.130
	SRR5643528	five period of Gastrodia elata	3.980
	SRR5643658	five period of Gastrodia elata	4.820
	SRR5643659	five period of Gastrodia elata	10.890
	SRR5643660	five period of Gastrodia elata	13.280
	SRR5643661	five period of Gastrodia elata	12.940
	SRR5643662	five period of Gastrodia elata	8.250
	SRR5643663	five period of Gastrodia elata	6.830
	SRR5643664	five period of Gastrodia elata	4.950
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.010
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.650
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.370
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.710
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.990
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.350
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.230
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.240
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.610
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.300
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.840
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.840
SRP279888	Gastro	Gastrodia elata tuber	9.56
	Juven	Juvenile tuber	18.98
	Mother_Gastro	Mother tuber of Gastrodia elata	6.56
	Mother_Juven	Mother tuber of Juvenile	9.24