Detail information of GWHGAAEX006516/evm.TU.scaffold_186.7
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|194333519|ref|YP_002015379.1| | 4.00E-18 | NAD-dependent epimerase/dehydratase [Prosthecochloris aestuarii DSM 271] |
| KOG | KOG1502 | 2.00E-44 | Flavonol reductase/cinnamoyl-CoA reductase |
| nr | gi|743770792|ref|XP_010915682.1| | 3.80E-107 | PREDICTED: dihydroflavonol-4-reductase-like [Elaeis guineensis] |
| Swissprot | tr|P51102|DFRA_ARATH | 9.00E-43 | Dihydroflavonol-4-reductase |
| trEMBL | tr|C5XDT9|C5XDT9_SORBI | 2.00E-105 | Putative uncharacterized protein Sb02g038530 {ECO:0000313|EMBL:EER99671.1} |
| TAIR | AT4G27250 | 2.00E-44 | NAD(P)-binding Rossmann-fold superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000193 | 137418 | 154089 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006516
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01370.20 | Epimerase | 13 | 265 | 3.20E-13 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0050662 | Molecular Function | coenzyme binding |
| GO:0003824 | Molecular Function | catalytic activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 48.640 |
| SRR2545915 | Juvenile tuber | 21.160 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 58.010 |
| SRR5643514 | five period of Gastrodia elata | 23.090 | |
| SRR5643515 | five period of Gastrodia elata | 30.780 | |
| SRR5643524 | five period of Gastrodia elata | 27.160 | |
| SRR5643525 | five period of Gastrodia elata | 6.020 | |
| SRR5643528 | five period of Gastrodia elata | 4.450 | |
| SRR5643658 | five period of Gastrodia elata | 5.960 | |
| SRR5643659 | five period of Gastrodia elata | 13.150 | |
| SRR5643660 | five period of Gastrodia elata | 12.090 | |
| SRR5643661 | five period of Gastrodia elata | 23.020 | |
| SRR5643662 | five period of Gastrodia elata | 39.420 | |
| SRR5643663 | five period of Gastrodia elata | 11.590 | |
| SRR5643664 | five period of Gastrodia elata | 12.840 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 54.550 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 97.980 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 72.620 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 63.260 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 43.930 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 44.520 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 40.470 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 82.340 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 51.710 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 36.190 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 52.700 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 52.700 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 25.10 |
| Juven | Juvenile tuber | 82.00 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 21.03 | |
| Mother_Juven | Mother tuber of Juvenile | 18.77 |