Detail information of GWHGAAEX006519/evm.TU.scaffold_186.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297621203|ref|YP_003709340.1|4.00E-11serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
KOGKOG06981.00E-100Serine/threonine protein phosphatase
nrgi|672118573|ref|XP_008782499.1|3.01E-156PREDICTED: probable protein phosphatase 2C 12 isoform X1 [Phoenix dactylifera]
Swissprottr|Q6Z8B9|P2C12_ORYSJ3.00E-121Probable protein phosphatase 2C 12
trEMBLtr|M0TG14|M0TG14_MUSAM1.00E-129Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P09260_001}
TAIRAT1G035901.00E-100Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000193268454270554+
Transcript Sequence

Network for GWHGAAEX006519

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C823072.30E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms54.410
SRR2545915Juvenile tuber31.000
SRP108465SRR5643513five period of Gastrodia elata51.840
SRR5643514five period of Gastrodia elata36.850
SRR5643515five period of Gastrodia elata38.820
SRR5643524five period of Gastrodia elata37.830
SRR5643525five period of Gastrodia elata32.870
SRR5643528five period of Gastrodia elata16.640
SRR5643658five period of Gastrodia elata31.400
SRR5643659five period of Gastrodia elata21.420
SRR5643660five period of Gastrodia elata20.010
SRR5643661five period of Gastrodia elata27.950
SRR5643662five period of Gastrodia elata19.900
SRR5643663five period of Gastrodia elata15.730
SRR5643664five period of Gastrodia elata13.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_150.350
SRR6049655Rhizomagastrodiae_C368-T10_good_140.150
SRR6049656Rhizomagastrodiae_C368-T07_good_147.820
SRR6049657Rhizomagastrodiae_C368-T07_good_163.830
SRR6049658Rhizomagastrodiae_C368-T04_good_177.210
SRR6049659Rhizomagastrodiae_C368-T04_good_185.450
SRR6049660Rhizomagastrodiae_C368-T01_good_162.470
SRR6049661Rhizomagastrodiae_C368-T04_good_165.540
SRR6049662Rhizomagastrodiae_C368-T01_good_140.280
SRR6049663Rhizomagastrodiae_C368-T01_good_146.250
SRR6049664Rhizomagastrodiae_C368-T10_good_152.870
SRR6049665Rhizomagastrodiae_C368-T10_good_152.870
SRP279888GastroGastrodia elata tuber 26.36
JuvenJuvenile tuber64.25
Mother_GastroMother tuber of Gastrodia elata 96.38
Mother_JuvenMother tuber of Juvenile 62.45