Gene detail

Detail information of GWHGAAEX006522/evm.TU.scaffold_186.13

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|307150901\|ref\|YP_003886285.1\|	2.00E-12	G-D-S-L family lipolytic protein [Cyanothece sp. PCC 7822]
nr	gi\|406781249\|gb\|AFS60085.1\|	0	lanatoside 15-O-acetylesterase [Paphiopedilum concolor]
Swissprot	tr\|Q9M153\|GDL61_ARATH	1.00E-162	GDSL esterase/lipase At4g01130 (Precursor)
trEMBL	tr\|M0RI87\|M0RI87_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P14610_001}
TAIR	AT4G01130	5.00E-162	GDSL-like Lipase/Acylhydrolase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000193	343240	374085	-

Transcript Sequence
>GWHTAAEX006522 TTTTTATTCAGCTTAAAAAAAAAAACGAATCATTTTATAATTATGCTAGTTTCATATTAATTCTTAAATAAATATTTGGACTGATATAGTCTTTTCCTTCCGGTAAAGTTAAATTTGATTCCAACACGAAATTTCAAATATATACTACTTAAATTAAATTTAAGATAAAAAGCTACCATCTCACCCCTTATTAAACCCAACAACCAAAAGCAAATGAATGCACGTACACCGTCCGATCCCGATTCAACGGCCTCAATCCAGCCACGAAACGTTCGAGCCATCCAGGAGCAACAAACTGGCTCCCTACCTACCAACGCAGGATTGCTGCCGGAACCCTAGCTGCTGCCGCTCAAGGTCATACAACATGTAATAATTCTGCTGTTGGAAGCTCCCGAGGATGATCGCCGGACCTCGGCCTCCAACTCCGGCATCCCCACCGGAGACGATCGTCAGACAAATCGCAGGCCGGAAATCCCCCACAACAGCAAAGTAATTCTCAAGCGGAAGCCGCATCTTGGAGCCGCCTTTGAAATGGAAAACGAGATCCGGCAGCCTCACCTTCGTCTCCGCTTCCCGTAACTCAAAGCAGGGCCTCAGCCCCGTTAGCCCCTCGACCTCACCGGAACGGTTTAACTGCCCGGCCACTTGATCCCCAAACGCGGCTGCGATCGGATCGAAAACCGCCGGCTCCATGAACGTGAACGTCGTTCCAGAATCGACGATCGTGCCGCCGTTCCCGTCCAACCCAGGCGCAAGCGCCCTGTAAGGAATCTTCACCTTCTTTCCACCTACGGCAATGCTCCTCAGTTTCACGTAATAATAAACGGAAAATGCCGAAGCGCCGTCGATGGCGTCGGCTGCAGCTGCGACCGGAACGGGGTTTTTTACAAGGGGCGTGAAATGAAACCCGGCGTTTCCGGATTCAGGACGCACGCTGTTTAGCAACAGGGTTCCGCTCTCCTCTGAATCGTCATATTTCCGCGAGATGAGACAGTAGGAGAAACTCTTTAATCCAAGCTGCTGCGGGAGAGAGGAGTTCCCGCGGCCGAATCCTGCGATTCCGCTGGCCGGAATCCCGACCGAGAAAACAGAGCATCCGACGACGAAATCGGAGATCGTGTGGGACGGAAAGCGCATCGTTTCGGAGAGGAGCAGCCCGGCGGTGGATCCCGATCCGTAGAAGATCAGGTAGGGCGGACAGATCTGAGAACAATCGGAGGAATTCGAAGGGCAGTAGCGGCATCGCGATAGGAATTCGGGGGAATGGATCCAGCTGCATTTGGTATTCTTGCAGCCGATGAGCTTGGAGGTGGAGGATGATTTGGGGAAGAAGGTCGGAATCTGAGCTGCGGCGGAGGAGGGATTCTCCGGCGATGAGGAACAGTTCTGGCACTCGTACTTGGAGGTGCAGGGGATCCATGTGAGTTGGCTGCCAGTGTCAATGACAAGGGGGATTTCCTGCGGGGGGGTTCCGAAGCTGACGTTAATGGAGTAGCCGCCGTAAGAGTGGGCGAAGAGGGCGGAACGAGTGGAAGGGGGGGTGGTGGTCGGATTCTTTAGCAGATGAGCGCGGAGAACAGAGGCGGAGGCCATTCCGGCGATCCGCTCAAAGGAGTCCGGAAACAGAGGAGATCGAATTCGACGAAGCGGAATGGAAATGGCATTTTCGCCGTCATCTGCTCCGGCAATGGCGATGGGTAGAAGAAGAGTGAAACAGAGGAAGAAGTGATGGCAGCAGAACTGAGGCATGGCAGCGGATCAGTGGGCACGCAAGGACAGCAGAGTATGCTTTTTCTTGATCTGAGATGCGTGTGCTTTTGGAAGTGCGGTGGGTTCGGGCGGGCCCCTACAGCCTGCTGTAAAGCCCACAGTCGTTTGTATTTATCACCGCCGTGTCGGGTCGGGCTGACCCATCACTAGTGCTGTTTCCCTCCCCTCCGCCAACATTCTTCAACAATGCCACTCGCCAACAGAAGGGCCGTCATTTTCTTTCTCCTGCCGCTCGTTCTGTTTCCTGCCTTCGTCGATGGAGCTAGCTGCCGCTTTCGAGCAATCTTCAACTTTGGGGACTCCAACTCCGACACAGGAGGCTTCTGGGCCGCCTTCCCGGCTCAGCACGGCCCATTTGGACTCACCTTCTTCAAACGGCCCGCTGGCCGGGCTTCCGACGGGAGGCTCGTAATCGATTTCTTAGCTCAGGCCATCGGGTTGCCCTTTCTGAGCCCATACCTTCAGTCCATCGGGTCGAGTTTTGAGCATGGCGCTAACTTTGCGACGCTGGCTTCCACGGTTTTGATGCCCAACACGTCGTTATTTGTTTCTGGGATCAGCCCTTTTTACCTCGCGGTTCAACTGAACCAAATGAAGGACTTTAGAGATAGAGTTCTTCAAGTGAGCTCCGAAGCCAATCTTCCACCTCATGATATTTTTGGTCAGGCTCTCTACACTTTAGATATTGGCCAGAATGATTTCACTTCTAACCTAGCAAAGATTGGCATTAGCGGGGTGCAGCAGTATCTTCCTCAGGTTGCCGATCAGATTGGGAGATCAGTAAAGGAGCTATATGACATTGGAGGTAGAACATTTTTTGTGTTCAACCTCGCACCGATCGGCTGCTTCCCAGCTTTCCTCAAGGAACTTCCTCACAATACTTCAGACATGGATGAGTTTGGATGTATGATTTCTTACAACAACGCTGTTGCTGATTACAACAGTTTGTTGAATCAAACGCTGCATCAAATTCAAGACCAGCTTAATGATGCCTCAGTTGTTTATGTTGATACACATTCTATGAAGCTTGAGCTCTACAGGCATCCAGAAACTTATGGGTTCTCATATTCAACTAGAGCTTGTTGTGGATATGGCGGTGGAGATTACAACTTCGATCCTGGGTTATTCTGTGGAAATAGCAAGGAGATTAATGGAAGAACAGTAACTGCACTTGCTTGCCCTTACCCAGAAAGGTATGTGAGCTGGGATGGCATACATGCCTCAGAAGCTGCAAATAAGCTTCTGACTGTGACCATTCTCAATGGCTCTCACTTTTACCCTACATTTCCTCTCTCAGAGCTGTGTGACTTGCAACCAATAGGCTGAATGTCTTGGTTTCATTTGTTTGAGAGTTTAATTTCTCTTAAATAAAATTGACTTATTACAATTTCATGTTGCGCTAGCTCTAAATTGTGTGAATTTAGAAGGACAATCCACAACAATCATGATGGATTGCTTTTGTGAGTGATCTAATGAATTTAAAAGATGTTTCCATGTTTTTAAAGATTAATTTGGGATTTAAATATCATCGGCTTCATGCATATAATGAGGATATGGTTGTTTTTTGTGCTCCATACAGCC

Network for GWHGAAEX006522

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00657.21	Lipase_GDSL	33	353	4.60E-23

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.580
SRP064423	SRR2545915	Juvenile tuber	12.830
SRP108465	SRR5643513	five period of Gastrodia elata	28.530
	SRR5643514	five period of Gastrodia elata	23.380
	SRR5643515	five period of Gastrodia elata	24.890
	SRR5643524	five period of Gastrodia elata	19.740
	SRR5643525	five period of Gastrodia elata	26.090
	SRR5643528	five period of Gastrodia elata	21.580
	SRR5643658	five period of Gastrodia elata	29.600
	SRR5643659	five period of Gastrodia elata	22.890
	SRR5643660	five period of Gastrodia elata	18.200
	SRR5643661	five period of Gastrodia elata	21.010
	SRR5643662	five period of Gastrodia elata	22.990
	SRR5643663	five period of Gastrodia elata	28.570
	SRR5643664	five period of Gastrodia elata	20.710
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	25.740
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	30.710
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	26.020
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	28.270
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	21.840
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	20.220
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	22.010
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	21.940
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	29.010
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	21.880
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	27.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	27.850
SRP279888	Gastro	Gastrodia elata tuber	15.73
	Juven	Juvenile tuber	19.15
	Mother_Gastro	Mother tuber of Gastrodia elata	11.90
	Mother_Juven	Mother tuber of Juvenile	9.09