Detail information of GWHGAAEX006524/evm.TU.scaffold_186.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|557694902|ref|YP_008797956.1|5.00E-25ubiquitin-conjugating enzyme E2-like protein [Candidatus Caldiarchaeum subterraneum]
KOGKOG04172.00E-105Ubiquitin-protein ligase
nrgi|596009469|ref|XP_007218529.1|7.00E-106hypothetical protein PRUPE_ppa012628mg [Prunus persica]
Swissprottr|P35132|UBC9_ARATH5.00E-106SUMO-conjugating enzyme UBC9
trEMBLtr|M5XDZ1|M5XDZ1_PRUPE3.00E-106Uncharacterized protein {ECO:0000313|EMBL:EMJ19728.1}
TAIRAT4G279602.00E-105ubiquitin conjugating enzyme 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000193418229430588+
Transcript Sequence

Network for GWHGAAEX006524

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.25UQ_con51414.50E-54
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms654.740
SRR2545915Juvenile tuber702.990
SRP108465SRR5643513five period of Gastrodia elata759.560
SRR5643514five period of Gastrodia elata720.070
SRR5643515five period of Gastrodia elata732.820
SRR5643524five period of Gastrodia elata727.210
SRR5643525five period of Gastrodia elata860.630
SRR5643528five period of Gastrodia elata693.440
SRR5643658five period of Gastrodia elata928.050
SRR5643659five period of Gastrodia elata819.300
SRR5643660five period of Gastrodia elata901.660
SRR5643661five period of Gastrodia elata842.980
SRR5643662five period of Gastrodia elata779.910
SRR5643663five period of Gastrodia elata863.630
SRR5643664five period of Gastrodia elata847.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1661.000
SRR6049655Rhizomagastrodiae_C368-T10_good_11102.940
SRR6049656Rhizomagastrodiae_C368-T07_good_1655.920
SRR6049657Rhizomagastrodiae_C368-T07_good_1699.830
SRR6049658Rhizomagastrodiae_C368-T04_good_1779.740
SRR6049659Rhizomagastrodiae_C368-T04_good_1830.710
SRR6049660Rhizomagastrodiae_C368-T01_good_1665.840
SRR6049661Rhizomagastrodiae_C368-T04_good_1689.240
SRR6049662Rhizomagastrodiae_C368-T01_good_1522.650
SRR6049663Rhizomagastrodiae_C368-T01_good_1631.770
SRR6049664Rhizomagastrodiae_C368-T10_good_1685.660
SRR6049665Rhizomagastrodiae_C368-T10_good_1685.660
SRP279888GastroGastrodia elata tuber 896.04
JuvenJuvenile tuber1,115.77
Mother_GastroMother tuber of Gastrodia elata 724.54
Mother_JuvenMother tuber of Juvenile 832.15