Detail information of GWHGAAEX006528/evm.TU.scaffold_186.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|22299334|ref|NP_682581.1|1.00E-48(3R)-hydroxymyristoyl-ACP dehydratase [Thermosynechococcus elongatus BP-1]
nrgi|672116628|ref|XP_008781484.1|1.53E-102PREDICTED: uncharacterized protein LOC103701264 [Phoenix dactylifera]
trEMBLtr|A0A061DQI0|A0A061DQI0_THECC4.00E-102Thioesterase superfamily protein isoform 1 {ECO:0000313|EMBL:EOX92168.1}
TAIRAT5G101609.00E-100Thioesterase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000193531877538485-
Transcript Sequence

Network for GWHGAAEX006528

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07977.12FabA1022271.40E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02372fabZ Metabolic pathways map01100
Fatty acid metabolismmap01212
Fatty acid biosynthesismap00061
Biotin metabolismmap00780

Gene Ontology

GO term OntologyName
GO:0006633Biological Processfatty acid biosynthetic process
GO:0016836Molecular Functionhydro-lyase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.670
SRR2545915Juvenile tuber57.480
SRP108465SRR5643513five period of Gastrodia elata28.150
SRR5643514five period of Gastrodia elata27.210
SRR5643515five period of Gastrodia elata32.320
SRR5643524five period of Gastrodia elata26.070
SRR5643525five period of Gastrodia elata29.460
SRR5643528five period of Gastrodia elata46.860
SRR5643658five period of Gastrodia elata25.070
SRR5643659five period of Gastrodia elata38.320
SRR5643660five period of Gastrodia elata36.590
SRR5643661five period of Gastrodia elata36.710
SRR5643662five period of Gastrodia elata43.650
SRR5643663five period of Gastrodia elata45.850
SRR5643664five period of Gastrodia elata38.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.520
SRR6049655Rhizomagastrodiae_C368-T10_good_115.970
SRR6049656Rhizomagastrodiae_C368-T07_good_121.550
SRR6049657Rhizomagastrodiae_C368-T07_good_118.500
SRR6049658Rhizomagastrodiae_C368-T04_good_115.510
SRR6049659Rhizomagastrodiae_C368-T04_good_111.970
SRR6049660Rhizomagastrodiae_C368-T01_good_116.450
SRR6049661Rhizomagastrodiae_C368-T04_good_116.880
SRR6049662Rhizomagastrodiae_C368-T01_good_123.600
SRR6049663Rhizomagastrodiae_C368-T01_good_117.180
SRR6049664Rhizomagastrodiae_C368-T10_good_124.590
SRR6049665Rhizomagastrodiae_C368-T10_good_124.590
SRP279888GastroGastrodia elata tuber 34.62
JuvenJuvenile tuber21.56
Mother_GastroMother tuber of Gastrodia elata 28.73
Mother_JuvenMother tuber of Juvenile 36.34