Gene detail

Detail information of GWHGAAEX006537/evm.TU.scaffold_186.28

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0799	3.00E-176	Branching enzyme
nr	gi\|743796072\|ref\|XP_010924638.1\|	0	PREDICTED: xylosyltransferase oxt-like [Elaeis guineensis]
trEMBL	tr\|F4JIW2\|F4JIW2_ARATH	2.00E-179	Glycosyltransferase {ECO:0000313\|EMBL:AHL38675.1}
TAIR	AT3G15350	3.00E-176	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000193	816197	820726	-

Transcript Sequence
>GWHTAAEX006537 TGATTAAGTGTAAGTTAATTTAGGTTCTCTAGATCCTTGGAAGATTTGTAGTCCACCCATCTTATAAGACTAAGAGTTTGTCTTATAGTTATTGTTGTAGTCGTTTAAGAAAGCAAATAAAATCATTTGGTCAAAATGTGTGGCCACGATAGCATGAGAAAGCTTCCAACTATGCCTAAAAAACTGTGAACTCAAATAATTTGATGTCCTAAATATGTGGTATTTGTGTTTCTTTCCCTGCACTTCCCTGTCCCTACGGTCTCTAAAATCATCAAATGCAAAATTTGCAAAGTACGTAACAAGGCGCATTACAGAGGCAGGGGAGCTCGTCAACTGTTCAATCGTCAACCTAACCATAAACCCGAGTATTTCCCCAAAATGTTACAACACTTTTCTTTTTCCTCTCTCCCTCTCTCTCTAAATAGTTGCTGATTTTCCAAAGCAAAACAGACATAGCCCCATCCTTCTTCCTTCGACCATTAAAATTTGAATCTTTTCTCCACCTCTGCTCTTAATTTCGATCCTCCAGCCACTCTACAATCCTTACACTCAAATTCAATCATCCCCCCTCTTTCTTTCCATTCCCAGCTCTCAAAACCCCTTCTTTTGTTCCAAAAGATAAAAAGAAAACAGAGCAAAACAGAGCATCAAAGGCAACGAGAGCGGATGGATTACCTTAGAGAAAGATTGTCCCTTTTACCCGCGCAAGCAGAAAAGAGATGCACACTGCCCATCCTCGTAACCCCCCTTCTCTTGGCCTTCATTTTCCTGACGTCTCTGAACATGGGCCTCCTCGCCTACCTCTCCTCTCTGAACGCCGGCCTCATCTCGCCAGCACTCAACACCTCCGCTCCATCTCCGATGCCGTCGTCTGTTCCGCCGGCGCCGCCTCCCCTTCCGCCTCCAGTCATCGTCCCCCGCCTCGCCTACTTCATTTCGGGCTCAAAAGGCGACCTTGAGCCCCTTTGGAGAGTGGTCTACGCTATCTACCATCCTCGAAACCTCTATCTTCTGCACCTCGACCTTGAGTCGCCATTGGCAGAGAGGACGAAGCTCGCCCATCGCATCTCCAACCATTCCCTCTTCTCTTCCGTCGGAAACGTGCACGTGATAAGAAAGGCGAACATGGTGACTTACAGAGGCTCCACGATGATTGCGAACACTCTTCACGCTTGCGCGATTCTTCTCAAGTTGAGCAGCGACTGGGATTGGTTCATCAATCTCAGCGCTTCGGACTACCCTCTTGTAACGCAGGATGATCTGCTGTTCACTTTTTCAAAGCTGCCGAAAGGTCTCAACTTTATAGAGCATACGAGTAAATTGGGTTGGAAGGAGGAGCAGAGGGGAAAGCCGGTGATCATAGATCCTGGCCTTTACAAGAAGCAGAAAGCAGATGTTATCTGGGTGACGCCGAAGAGAGAGCTGCCTGATGCGTTCAAGTTATTCACAGGGTCTGCATGGATGGCTCTAAGCCGGGAATTCGTAGAATACTGCGTGTGGGGATGGGACAACCTGCCGCGGACTCTGCTGATGTACTACACGAACTCCGTGTCTTCGCCGGAGGGCTACTTCCAGACGGTCCTCTGCAACTCGGTAGACTTCAATACGACGGTGGTGAACCACGACCTGCACTACATTCTGTGGGACAATCCTCCGAAGCAGCACCCGCACGTGCTCACCGTCAGCGACATGGAAGCCATGATAGCCAGCAACTCCCCCTTCGCCAGAAAGTTCCGAAAAAACGATCCCGCGCTCGACCGGATCGACGTTGAGCTCCTCAGCCGCCGGAACAAGGACGAGGTAGTCCCAGGAGGATGGTGCTCTGAACCTTGCTCCAATGTTACCCACCATGGAACAAAGCTCATCCCCGGACCCGGATCCCGCAGACTCGCCAACCTCATGCACAGCCTACGCGTGTCTTCGGATGCATTCAAGATGCGCCAATGCGTGCGCTAATTTGTACAAAAGGGAATTAATAGCATGTTCTTTTGGCAATTGTAGATTAAACTTGTGCTATGGATTAACAACAATCAATCCTGCTTGTAATTAAACTTGTTAGCAAAGGTTGACTGAAGAGAAAGACAAGATCAGAATTCAAAAGTTGGATTCATACGCAGCCCTGAGGACGGAGATCACTAAAAGTAGGTGTGTGACTTTAGTTGAGCTTGAGCGATCAACTGTTGTATTCAAGTTCAAGCTTGTTTCAATTTGAGCATATTATCACCTAACGTTCAAATTGTTGGAAAAGCCTATGTTCTTATTCAGCTCAATATAGATTCAATCAGCTCATGTTTGACTCAAATTTGTGATTTGACCTGAATTAGATCTCATTATAGGCAGTGGAGGTGCGTTTGAATTAAGCTCATATTCATTAAAATAAATGTATTTGACCCTTTAATGAGCCGAGCACAATCGAATAATACTCTATTTGTAAACTCACCAACGAAACGAACACAAAATATTCAATCAAAACTTGTTTGAGATCAATAATCATTTCTCGCAATCTTACTTAAAAGATCAAAAGCCATCACAATGTTCAACCTTAAAATGTCATTTTTCAACATTTCTTTTGTAAACCAAAATGTACATAAAGTGAACATTATCAAATAAATTTGAGACATATTTCAAGGCAATTGGATGAACCAGCATAATTTTCCAATGTTCAAAACTTGATTTTCTTAATCAAATCCCAGGATGGAACCATTTTTGATGAACTCCTCAATCATCAATGAACATGGTTCTCCAGTACACTAAACATAATTCTGGCAGGCATCCACCACCACTATACAGCAAAATATGTACCTTTTCACAAATTGTTGCAACTCAATTTGCAGCATGCATGGGTGGTAT

Network for GWHGAAEX006537

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02485.20	Branch	86	345	1.80E-72

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008375	Molecular Function	acetylglucosaminyltransferase activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.760
SRP064423	SRR2545915	Juvenile tuber	0.760
SRP108465	SRR5643513	five period of Gastrodia elata	6.790
	SRR5643514	five period of Gastrodia elata	10.490
	SRR5643515	five period of Gastrodia elata	7.280
	SRR5643524	five period of Gastrodia elata	9.090
	SRR5643525	five period of Gastrodia elata	2.740
	SRR5643528	five period of Gastrodia elata	6.980
	SRR5643658	five period of Gastrodia elata	3.560
	SRR5643659	five period of Gastrodia elata	0.940
	SRR5643660	five period of Gastrodia elata	0.900
	SRR5643661	five period of Gastrodia elata	1.280
	SRR5643662	five period of Gastrodia elata	1.770
	SRR5643663	five period of Gastrodia elata	1.450
	SRR5643664	five period of Gastrodia elata	1.370
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	15.040
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.400
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.500
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.790
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.870
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.380
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.520
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.180
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.950
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.650
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	29.870
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	29.870
SRP279888	Gastro	Gastrodia elata tuber	0.43
	Juven	Juvenile tuber	2.30
	Mother_Gastro	Mother tuber of Gastrodia elata	5.98
	Mother_Juven	Mother tuber of Juvenile	8.02