Detail information of GWHGAAEX006564/evm.TU.scaffold_186.63
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|158312054|ref|YP_001504562.1| | 9.00E-19 | metallophosphoesterase [Frankia sp. EAN1pec] |
| KOG | KOG1378 | 0 | Purple acid phosphatase |
| nr | gi|326514072|dbj|BAJ92186.1| | 0 | predicted protein [Hordeum vulgare subsp. vulgare] |
| Swissprot | tr|Q93WP4|PEPP_ALLCE | 0 | Phosphoenolpyruvate phosphatase (Precursor) |
| trEMBL | tr|M0USG3|M0USG3_HORVD | 0 | Purple acid phosphatase {ECO:0000256|RuleBase:RU361203} |
| TAIR | AT5G34850 | 0 | purple acid phosphatase 26 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000193 | 1600909 | 1690146 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006564
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF16656.4 | Pur_ac_phosph_N | 64 | 155 | 1.70E-20 |
| PF00149.27 | Metallophos | 166 | 362 | 1.80E-22 |
| PF14008.5 | Metallophos_C | 385 | 443 | 2.00E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0046872 | Molecular Function | metal ion binding |
| GO:0003993 | Molecular Function | acid phosphatase activity |
| GO:0016787 | Molecular Function | hydrolase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 29.650 |
| SRR2545915 | Juvenile tuber | 27.950 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 28.080 |
| SRR5643514 | five period of Gastrodia elata | 41.920 | |
| SRR5643515 | five period of Gastrodia elata | 33.350 | |
| SRR5643524 | five period of Gastrodia elata | 42.430 | |
| SRR5643525 | five period of Gastrodia elata | 32.410 | |
| SRR5643528 | five period of Gastrodia elata | 57.390 | |
| SRR5643658 | five period of Gastrodia elata | 60.520 | |
| SRR5643659 | five period of Gastrodia elata | 17.420 | |
| SRR5643660 | five period of Gastrodia elata | 19.260 | |
| SRR5643661 | five period of Gastrodia elata | 16.910 | |
| SRR5643662 | five period of Gastrodia elata | 11.920 | |
| SRR5643663 | five period of Gastrodia elata | 14.190 | |
| SRR5643664 | five period of Gastrodia elata | 14.700 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 28.480 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.170 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 28.610 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 32.020 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 41.690 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 51.270 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 34.240 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 35.450 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 51.190 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 41.790 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 33.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 33.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 16.38 |
| Juven | Juvenile tuber | 19.61 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 30.19 | |
| Mother_Juven | Mother tuber of Juvenile | 24.00 |