Detail information of GWHGAAEX006565/evm.TU.scaffold_186.64


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10120Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain
nrgi|695040848|ref|XP_009408018.1|0PREDICTED: synaptotagmin-5-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q8L706|SYT5_ARATH0Synaptotagmin-5
trEMBLtr|M0TEX8|M0TEX8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P05380_001}
TAIRAT5G111000Calcium-dependent lipid-binding (CaLB domain) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019316935441728176-
Transcript Sequence

Network for GWHGAAEX006565

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17047.4SMP_LBD702482.10E-12
PF00168.29C22623662.10E-23
PF00168.29C24395387.80E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008289Molecular Functionlipid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.190
SRR2545915Juvenile tuber37.640
SRP108465SRR5643513five period of Gastrodia elata13.940
SRR5643514five period of Gastrodia elata15.430
SRR5643515five period of Gastrodia elata15.460
SRR5643524five period of Gastrodia elata16.190
SRR5643525five period of Gastrodia elata24.860
SRR5643528five period of Gastrodia elata29.730
SRR5643658five period of Gastrodia elata29.710
SRR5643659five period of Gastrodia elata21.760
SRR5643660five period of Gastrodia elata22.160
SRR5643661five period of Gastrodia elata23.460
SRR5643662five period of Gastrodia elata23.650
SRR5643663five period of Gastrodia elata22.610
SRR5643664five period of Gastrodia elata20.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.950
SRR6049655Rhizomagastrodiae_C368-T10_good_118.750
SRR6049656Rhizomagastrodiae_C368-T07_good_116.730
SRR6049657Rhizomagastrodiae_C368-T07_good_117.320
SRR6049658Rhizomagastrodiae_C368-T04_good_118.970
SRR6049659Rhizomagastrodiae_C368-T04_good_118.760
SRR6049660Rhizomagastrodiae_C368-T01_good_117.420
SRR6049661Rhizomagastrodiae_C368-T04_good_118.840
SRR6049662Rhizomagastrodiae_C368-T01_good_116.360
SRR6049663Rhizomagastrodiae_C368-T01_good_116.970
SRR6049664Rhizomagastrodiae_C368-T10_good_117.490
SRR6049665Rhizomagastrodiae_C368-T10_good_117.490
SRP279888GastroGastrodia elata tuber 36.11
JuvenJuvenile tuber19.50
Mother_GastroMother tuber of Gastrodia elata 24.38
Mother_JuvenMother tuber of Juvenile 22.96