Detail information of GWHGAAEX006574/evm.TU.scaffold_187.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|159037211|ref|YP_001536464.1|2.00E-22SRA-YDG domain-containing protein [Salinispora arenicola CNS-205]
KOGKOG10823.00E-97Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
nrgi|672137397|ref|XP_008792425.1|0PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like [Phoenix dactylifera]
Swissprottr|Q9FF80|SUVH1_ARATH0Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1
trEMBLtr|K3Z4C0|K3Z4C0_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si021388m}
TAIRAT5G04940_23.00E-97Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000184263060267837-
Transcript Sequence

Network for GWHGAAEX006574

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02182.16SAD_SRA2003566.00E-47
PF05033.15Pre-SET3844832.10E-18
PF00856.27SET5026342.50E-21
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilySET

KEGG pathway

KO Enzyme pathway mapID
K11420EHMT Metabolic pathways map01100
Lysine degradationmap00310
Longevity regulating pathwaymap04211

Gene Ontology

GO term OntologyName
GO:0034968Biological Processhistone lysine methylation
GO:0016571Biological Processhistone methylation
GO:0008270Molecular Functionzinc ion binding
GO:0005515Molecular Functionprotein binding
GO:0018024Molecular Functionhistone-lysine N-methyltransferase activity
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.640
SRR2545915Juvenile tuber20.490
SRP108465SRR5643513five period of Gastrodia elata22.180
SRR5643514five period of Gastrodia elata18.480
SRR5643515five period of Gastrodia elata18.480
SRR5643524five period of Gastrodia elata18.200
SRR5643525five period of Gastrodia elata13.390
SRR5643528five period of Gastrodia elata13.270
SRR5643658five period of Gastrodia elata16.610
SRR5643659five period of Gastrodia elata15.660
SRR5643660five period of Gastrodia elata19.650
SRR5643661five period of Gastrodia elata19.370
SRR5643662five period of Gastrodia elata21.220
SRR5643663five period of Gastrodia elata18.630
SRR5643664five period of Gastrodia elata20.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.960
SRR6049655Rhizomagastrodiae_C368-T10_good_121.580
SRR6049656Rhizomagastrodiae_C368-T07_good_124.480
SRR6049657Rhizomagastrodiae_C368-T07_good_127.180
SRR6049658Rhizomagastrodiae_C368-T04_good_129.620
SRR6049659Rhizomagastrodiae_C368-T04_good_132.230
SRR6049660Rhizomagastrodiae_C368-T01_good_125.920
SRR6049661Rhizomagastrodiae_C368-T04_good_128.610
SRR6049662Rhizomagastrodiae_C368-T01_good_119.970
SRR6049663Rhizomagastrodiae_C368-T01_good_121.660
SRR6049664Rhizomagastrodiae_C368-T10_good_118.770
SRR6049665Rhizomagastrodiae_C368-T10_good_118.770
SRP279888GastroGastrodia elata tuber 19.08
JuvenJuvenile tuber21.24
Mother_GastroMother tuber of Gastrodia elata 15.51
Mother_JuvenMother tuber of Juvenile 17.87