Detail information of GWHGAAEX006577/evm.TU.scaffold_187.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16032.00E-28Copper chaperone
nrgi|743768276|ref|XP_010914416.1|1.12E-37PREDICTED: uncharacterized protein LOC105039828 [Elaeis guineensis]
Swissprottr|Q9SZN7|HIP26_ARATH5.00E-12Heavy metal-associated isoprenylated plant protein 26 (Precursor)
trEMBLtr|D7U255|D7U255_VITVI5.00E-36Putative uncharacterized protein {ECO:0000313|EMBL:CBI36821.3}
TAIRAT5G276902.00E-28Heavy metal transport/detoxification superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000184397920399197-
Transcript Sequence

Network for GWHGAAEX006577

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00403.25HMA20731.20E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.050
SRR2545915Juvenile tuber12.990
SRP108465SRR5643513five period of Gastrodia elata9.750
SRR5643514five period of Gastrodia elata8.310
SRR5643515five period of Gastrodia elata4.390
SRR5643524five period of Gastrodia elata4.230
SRR5643525five period of Gastrodia elata10.990
SRR5643528five period of Gastrodia elata9.040
SRR5643658five period of Gastrodia elata10.640
SRR5643659five period of Gastrodia elata19.880
SRR5643660five period of Gastrodia elata21.270
SRR5643661five period of Gastrodia elata16.130
SRR5643662five period of Gastrodia elata16.750
SRR5643663five period of Gastrodia elata20.790
SRR5643664five period of Gastrodia elata24.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.770
SRR6049655Rhizomagastrodiae_C368-T10_good_19.400
SRR6049656Rhizomagastrodiae_C368-T07_good_115.820
SRR6049657Rhizomagastrodiae_C368-T07_good_124.670
SRR6049658Rhizomagastrodiae_C368-T04_good_122.800
SRR6049659Rhizomagastrodiae_C368-T04_good_130.420
SRR6049660Rhizomagastrodiae_C368-T01_good_121.310
SRR6049661Rhizomagastrodiae_C368-T04_good_118.080
SRR6049662Rhizomagastrodiae_C368-T01_good_110.540
SRR6049663Rhizomagastrodiae_C368-T01_good_117.470
SRR6049664Rhizomagastrodiae_C368-T10_good_114.750
SRR6049665Rhizomagastrodiae_C368-T10_good_114.750
SRP279888GastroGastrodia elata tuber 22.26
JuvenJuvenile tuber10.00
Mother_GastroMother tuber of Gastrodia elata 11.46
Mother_JuvenMother tuber of Juvenile 4.65