Detail information of GWHGAAEX006592/evm.TU.scaffold_187.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41374.00E-21Uncharacterized conserved protein
nrgi|672119032|ref|XP_008782740.1|9.94E-70PREDICTED: INO80 complex subunit C [Phoenix dactylifera]
trEMBLtr|M0T7D7|M0T7D7_MUSAM2.00E-66Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P15890_001}
TAIRHS174571414.00E-21Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000184742012760777-
Transcript Sequence

Network for GWHGAAEX006592

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08265.10YL1_C751023.10E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.130
SRR2545915Juvenile tuber20.710
SRP108465SRR5643513five period of Gastrodia elata20.520
SRR5643514five period of Gastrodia elata30.360
SRR5643515five period of Gastrodia elata24.350
SRR5643524five period of Gastrodia elata27.240
SRR5643525five period of Gastrodia elata46.890
SRR5643528five period of Gastrodia elata53.460
SRR5643658five period of Gastrodia elata46.510
SRR5643659five period of Gastrodia elata25.610
SRR5643660five period of Gastrodia elata24.390
SRR5643661five period of Gastrodia elata29.090
SRR5643662five period of Gastrodia elata23.340
SRR5643663five period of Gastrodia elata24.080
SRR5643664five period of Gastrodia elata20.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.280
SRR6049655Rhizomagastrodiae_C368-T10_good_133.760
SRR6049656Rhizomagastrodiae_C368-T07_good_116.470
SRR6049657Rhizomagastrodiae_C368-T07_good_112.240
SRR6049658Rhizomagastrodiae_C368-T04_good_116.840
SRR6049659Rhizomagastrodiae_C368-T04_good_112.450
SRR6049660Rhizomagastrodiae_C368-T01_good_115.070
SRR6049661Rhizomagastrodiae_C368-T04_good_113.490
SRR6049662Rhizomagastrodiae_C368-T01_good_120.860
SRR6049663Rhizomagastrodiae_C368-T01_good_119.740
SRR6049664Rhizomagastrodiae_C368-T10_good_129.250
SRR6049665Rhizomagastrodiae_C368-T10_good_129.250
SRP279888GastroGastrodia elata tuber 37.38
JuvenJuvenile tuber31.80
Mother_GastroMother tuber of Gastrodia elata 35.01
Mother_JuvenMother tuber of Juvenile 32.72