Detail information of GWHGAAEX006594/evm.TU.scaffold_187.34
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|256390603|ref|YP_003112167.1| | 1.00E-28 | serine/threonine protein kinase [Catenulispora acidiphila DSM 44928] |
| KOG | KOG0660 | 0 | Mitogen-activated protein kinase |
| nr | gi|566188912|ref|XP_006378133.1| | 0 | hypothetical protein POPTR_0010s03070g [Populus trichocarpa] |
| Swissprot | tr|Q8W4J2|MPK16_ARATH | 0 | Mitogen-activated protein kinase 16 |
| trEMBL | tr|U5FXS2|U5FXS2_POPTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:ERP55930.1} |
| TAIR | AT5G19010 | 0 | mitogen-activated protein kinase 16 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000184 | 768551 | 794666 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006594
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 25 | 316 | 1.10E-67 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_MAPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0004707 | Molecular Function | MAP kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 19.990 |
| SRR2545915 | Juvenile tuber | 23.420 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 22.520 |
| SRR5643514 | five period of Gastrodia elata | 21.570 | |
| SRR5643515 | five period of Gastrodia elata | 20.580 | |
| SRR5643524 | five period of Gastrodia elata | 19.420 | |
| SRR5643525 | five period of Gastrodia elata | 16.250 | |
| SRR5643528 | five period of Gastrodia elata | 24.830 | |
| SRR5643658 | five period of Gastrodia elata | 15.350 | |
| SRR5643659 | five period of Gastrodia elata | 16.320 | |
| SRR5643660 | five period of Gastrodia elata | 19.000 | |
| SRR5643661 | five period of Gastrodia elata | 18.790 | |
| SRR5643662 | five period of Gastrodia elata | 18.270 | |
| SRR5643663 | five period of Gastrodia elata | 19.820 | |
| SRR5643664 | five period of Gastrodia elata | 18.490 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 19.150 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 27.360 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.790 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 18.490 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 21.800 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.840 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 17.210 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 17.660 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 13.530 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 15.680 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 29.480 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 29.480 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 16.63 |
| Juven | Juvenile tuber | 24.05 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 22.13 | |
| Mother_Juven | Mother tuber of Juvenile | 35.74 |