Detail information of GWHGAAEX006599/evm.TU.scaffold_187.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33139.00E-100Molecular chaperone Prefoldin, subunit 3
nrgi|672136028|ref|XP_008791694.1|5.62E-105PREDICTED: probable prefoldin subunit 3 [Phoenix dactylifera]
Swissprottr|P57741|PFD3_ARATH3.00E-100Probable prefoldin subunit 3
trEMBLtr|A0A068TS35|A0A068TS35_COFCA1.00E-104Coffea canephora
TAIRAT5G495109.00E-100prefoldin 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000184812808827344+
Transcript Sequence

Network for GWHGAAEX006599

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02996.16Prefoldin571752.00E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006457Biological Processprotein folding
GO:0016272Cellular Componentprefoldin complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms71.760
SRR2545915Juvenile tuber78.990
SRP108465SRR5643513five period of Gastrodia elata46.300
SRR5643514five period of Gastrodia elata66.680
SRR5643515five period of Gastrodia elata51.010
SRR5643524five period of Gastrodia elata56.650
SRR5643525five period of Gastrodia elata67.150
SRR5643528five period of Gastrodia elata84.630
SRR5643658five period of Gastrodia elata71.780
SRR5643659five period of Gastrodia elata49.610
SRR5643660five period of Gastrodia elata52.770
SRR5643661five period of Gastrodia elata45.470
SRR5643662five period of Gastrodia elata46.560
SRR5643663five period of Gastrodia elata48.170
SRR5643664five period of Gastrodia elata49.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_145.850
SRR6049655Rhizomagastrodiae_C368-T10_good_179.120
SRR6049656Rhizomagastrodiae_C368-T07_good_148.900
SRR6049657Rhizomagastrodiae_C368-T07_good_143.420
SRR6049658Rhizomagastrodiae_C368-T04_good_142.010
SRR6049659Rhizomagastrodiae_C368-T04_good_139.380
SRR6049660Rhizomagastrodiae_C368-T01_good_143.470
SRR6049661Rhizomagastrodiae_C368-T04_good_141.250
SRR6049662Rhizomagastrodiae_C368-T01_good_153.600
SRR6049663Rhizomagastrodiae_C368-T01_good_145.470
SRR6049664Rhizomagastrodiae_C368-T10_good_170.600
SRR6049665Rhizomagastrodiae_C368-T10_good_170.600
SRP279888GastroGastrodia elata tuber 78.90
JuvenJuvenile tuber61.73
Mother_GastroMother tuber of Gastrodia elata 42.22
Mother_JuvenMother tuber of Juvenile 50.81