Detail information of GWHGAAEX006607/evm.TU.scaffold_187.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|402772597|ref|YP_006592134.1|2.00E-07oxalate decarboxylase family protein [Methylocystis sp. SC2]
nrgi|743779895|ref|XP_010920368.1|1.75E-66PREDICTED: germin-like protein 9-3 [Elaeis guineensis]
Swissprottr|Q652P9|GL93_ORYSJ5.00E-56Germin-like protein 9-3 (Precursor)
trEMBLtr|D7TCS5|D7TCS5_VITVI2.00E-61Putative uncharacterized protein {ECO:0000313|EMBL:CBI28298.3}
TAIRAT1G095609.00E-36germin-like protein 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018410263071027282+
Transcript Sequence

Network for GWHGAAEX006607

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00190.21Cupin_1641971.00E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045735Molecular Functionnutrient reservoir activity
GO:0030145Molecular Functionmanganese ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.400
SRR2545915Juvenile tuber0.690
SRP108465SRR5643513five period of Gastrodia elata234.060
SRR5643514five period of Gastrodia elata124.400
SRR5643515five period of Gastrodia elata109.420
SRR5643524five period of Gastrodia elata71.540
SRR5643525five period of Gastrodia elata1.290
SRR5643528five period of Gastrodia elata1.410
SRR5643658five period of Gastrodia elata1.490
SRR5643659five period of Gastrodia elata0.530
SRR5643660five period of Gastrodia elata0.250
SRR5643661five period of Gastrodia elata0.500
SRR5643662five period of Gastrodia elata0.750
SRR5643663five period of Gastrodia elata0.510
SRR5643664five period of Gastrodia elata0.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1141.350
SRR6049655Rhizomagastrodiae_C368-T10_good_1498.420
SRR6049656Rhizomagastrodiae_C368-T07_good_1133.690
SRR6049657Rhizomagastrodiae_C368-T07_good_184.530
SRR6049658Rhizomagastrodiae_C368-T04_good_1139.020
SRR6049659Rhizomagastrodiae_C368-T04_good_1104.130
SRR6049660Rhizomagastrodiae_C368-T01_good_165.510
SRR6049661Rhizomagastrodiae_C368-T04_good_159.970
SRR6049662Rhizomagastrodiae_C368-T01_good_1109.080
SRR6049663Rhizomagastrodiae_C368-T01_good_1140.240
SRR6049664Rhizomagastrodiae_C368-T10_good_1480.230
SRR6049665Rhizomagastrodiae_C368-T10_good_1480.230
SRP279888GastroGastrodia elata tuber 0.25
JuvenJuvenile tuber0.07
Mother_GastroMother tuber of Gastrodia elata 6.63
Mother_JuvenMother tuber of Juvenile 2.76