Detail information of GWHGAAEX006614/evm.TU.scaffold_187.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743819926|ref|XP_010931656.1|1.43E-46PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Elaeis guineensis]
Swissprottr|Q9LZI6|NDS5B_ARATH5.00E-45NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B
trEMBLtr|F6H6Y8|F6H6Y8_VITVI8.00E-45Putative uncharacterized protein {ECO:0000313|EMBL:CCB48038.1}
TAIRAT3G627902.00E-44NADH-ubiquinone oxidoreductase-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018411185081135672-
Transcript Sequence

Network for GWHGAAEX006614

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10200.8Ndufs512662.30E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03938NDUFS5 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms137.570
SRR2545915Juvenile tuber77.480
SRP108465SRR5643513five period of Gastrodia elata163.740
SRR5643514five period of Gastrodia elata196.650
SRR5643515five period of Gastrodia elata165.520
SRR5643524five period of Gastrodia elata176.660
SRR5643525five period of Gastrodia elata176.980
SRR5643528five period of Gastrodia elata146.850
SRR5643658five period of Gastrodia elata184.780
SRR5643659five period of Gastrodia elata195.790
SRR5643660five period of Gastrodia elata221.240
SRR5643661five period of Gastrodia elata197.240
SRR5643662five period of Gastrodia elata205.400
SRR5643663five period of Gastrodia elata216.030
SRR5643664five period of Gastrodia elata276.920
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1139.810
SRR6049655Rhizomagastrodiae_C368-T10_good_1129.500
SRR6049656Rhizomagastrodiae_C368-T07_good_1130.460
SRR6049657Rhizomagastrodiae_C368-T07_good_1139.630
SRR6049658Rhizomagastrodiae_C368-T04_good_1149.620
SRR6049659Rhizomagastrodiae_C368-T04_good_1165.450
SRR6049660Rhizomagastrodiae_C368-T01_good_1123.650
SRR6049661Rhizomagastrodiae_C368-T04_good_1121.940
SRR6049662Rhizomagastrodiae_C368-T01_good_1120.530
SRR6049663Rhizomagastrodiae_C368-T01_good_1137.710
SRR6049664Rhizomagastrodiae_C368-T10_good_1170.490
SRR6049665Rhizomagastrodiae_C368-T10_good_1170.490
SRP279888GastroGastrodia elata tuber 145.79
JuvenJuvenile tuber156.67
Mother_GastroMother tuber of Gastrodia elata 89.81
Mother_JuvenMother tuber of Juvenile 100.32