Detail information of GWHGAAEX006615/evm.TU.scaffold_187.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|170290521|ref|YP_001737337.1|2.00E-19small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8]
KOGKOG00775.00E-131Vesicle coat complex COPII, GTPase subunit SAR1
nrgi|743844262|ref|XP_010938297.1|1.36E-133PREDICTED: GTP-binding protein SAR1A [Elaeis guineensis]
Swissprottr|O04834|SAR1A_ARATH2.00E-131GTP-binding protein SAR1A
trEMBLtr|A0A059AXI2|A0A059AXI2_EUCGR7.00E-133Uncharacterized protein {ECO:0000313|EMBL:KCW58366.1}
TAIRAT4G020805.00E-131secretion-associated RAS super family 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018411386811157348+
Transcript Sequence

Network for GWHGAAEX006615

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00025.20Arf81921.20E-63
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07953SAR1 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName
GO:0006886Biological Processintracellular protein transport
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms86.520
SRR2545915Juvenile tuber67.600
SRP108465SRR5643513five period of Gastrodia elata129.860
SRR5643514five period of Gastrodia elata121.040
SRR5643515five period of Gastrodia elata133.560
SRR5643524five period of Gastrodia elata124.450
SRR5643525five period of Gastrodia elata226.990
SRR5643528five period of Gastrodia elata268.620
SRR5643658five period of Gastrodia elata264.370
SRR5643659five period of Gastrodia elata103.380
SRR5643660five period of Gastrodia elata111.940
SRR5643661five period of Gastrodia elata128.740
SRR5643662five period of Gastrodia elata98.680
SRR5643663five period of Gastrodia elata91.450
SRR5643664five period of Gastrodia elata83.970
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_168.190
SRR6049655Rhizomagastrodiae_C368-T10_good_165.430
SRR6049656Rhizomagastrodiae_C368-T07_good_1116.420
SRR6049657Rhizomagastrodiae_C368-T07_good_175.120
SRR6049658Rhizomagastrodiae_C368-T04_good_1109.490
SRR6049659Rhizomagastrodiae_C368-T04_good_1110.970
SRR6049660Rhizomagastrodiae_C368-T01_good_1101.710
SRR6049661Rhizomagastrodiae_C368-T04_good_1110.380
SRR6049662Rhizomagastrodiae_C368-T01_good_1118.730
SRR6049663Rhizomagastrodiae_C368-T01_good_1116.290
SRR6049664Rhizomagastrodiae_C368-T10_good_1133.010
SRR6049665Rhizomagastrodiae_C368-T10_good_1133.010
SRP279888GastroGastrodia elata tuber 85.31
JuvenJuvenile tuber99.02
Mother_GastroMother tuber of Gastrodia elata 208.56
Mother_JuvenMother tuber of Juvenile 109.41