Detail information of GWHGAAEX006621/evm.TU.scaffold_187.62


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672175704|ref|XP_008807916.1|8.24E-69PREDICTED: mediator-associated protein 1-like [Phoenix dactylifera]
Swissprottr|Q9SB42|MDA1_ARATH4.00E-15Mediator-associated protein 1
trEMBLtr|A5B455|A5B455_VITVI1.00E-51Putative uncharacterized protein {ECO:0000313|EMBL:CAN65204.1}
TAIRAT3G049309.00E-37DNA-binding storekeeper protein-related transcriptional regulator

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018413075381309180-
Transcript Sequence

Network for GWHGAAEX006621

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04504.13DUF573461432.70E-31
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGeBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms65.230
SRR2545915Juvenile tuber58.360
SRP108465SRR5643513five period of Gastrodia elata92.070
SRR5643514five period of Gastrodia elata69.160
SRR5643515five period of Gastrodia elata92.960
SRR5643524five period of Gastrodia elata66.610
SRR5643525five period of Gastrodia elata240.470
SRR5643528five period of Gastrodia elata145.410
SRR5643658five period of Gastrodia elata149.280
SRR5643659five period of Gastrodia elata107.870
SRR5643660five period of Gastrodia elata80.410
SRR5643661five period of Gastrodia elata117.360
SRR5643662five period of Gastrodia elata139.110
SRR5643663five period of Gastrodia elata100.670
SRR5643664five period of Gastrodia elata179.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_183.870
SRR6049655Rhizomagastrodiae_C368-T10_good_191.430
SRR6049656Rhizomagastrodiae_C368-T07_good_176.060
SRR6049657Rhizomagastrodiae_C368-T07_good_166.910
SRR6049658Rhizomagastrodiae_C368-T04_good_172.480
SRR6049659Rhizomagastrodiae_C368-T04_good_178.420
SRR6049660Rhizomagastrodiae_C368-T01_good_174.180
SRR6049661Rhizomagastrodiae_C368-T04_good_164.120
SRR6049662Rhizomagastrodiae_C368-T01_good_163.440
SRR6049663Rhizomagastrodiae_C368-T01_good_179.770
SRR6049664Rhizomagastrodiae_C368-T10_good_191.850
SRR6049665Rhizomagastrodiae_C368-T10_good_191.850
SRP279888GastroGastrodia elata tuber 82.36
JuvenJuvenile tuber72.42
Mother_GastroMother tuber of Gastrodia elata 147.66
Mother_JuvenMother tuber of Juvenile 99.70