Gene detail

Detail information of GWHGAAEX006635/evm.TU.scaffold_187.77

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672139302\|ref\|XP_008793433.1\|	0	PREDICTED: uncharacterized protein LOC103709724 isoform X2 [Phoenix dactylifera]
Swissprot	tr\|P0CB22\|ATX2_ARATH	1.00E-07	Histone-lysine N-methyltransferase ATX2
trEMBL	tr\|F6H3G3\|F6H3G3_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB46751.1}
TAIR	AT4G32620	8.00E-129	Enhancer of polycomb-like transcription factor protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000184	1584534	1601075	+

Transcript Sequence
>GWHTAAEX006635 ATGACCATAGTTGGAAAGCTTAAGCTTAGGGTATGTGGCTCAGGGTTAAAAGGCAAAAGGCTTGTATCTGATGTATGTAAACGTGGGAAACAAAGCTCCAGTGTTGTTCTCAGGAGGTTGATAAGTGTGAGCGATACTTCACATAATATAGGCAATGTTTTTACTATGCCTTCGGGAAAGAATGGCAATAAATTGTCCAACGATTGTGATTTACACAGCACAAATGGCCTGGAAGGCAGTATCATTATTACAAAACCTCGAGGAGTTCCACGGCGTCAGAAACTGTTTCATTATTTTAACTCTGGCAGAGAAATAGTTGGGGCTGCTTCCAGCACCAGGAGTGCTGCCGATTTACAGAGTAATCAGCGGTCTGCTTCACGTTCTCATGTTCTTATGCCGAAGAGAAGGCTAACAGAATTTAATGAAGATGGTTCTACAGATAAAGTGGCTTTTAGTGGCATGGGGAATAGTGATAATTTGAATTTTGTCAAGACTACCAAAAGGAGGTCTCAAAGCAGAAAAGGGCTTGTTTCTAGTCGTGGCGATGTGCGTAGATCAAATGATTTGGAAGGCAGCATCATTGTCACAAAGCATCCTCGTGGTGTTACGAGCCGTAAAAAAATTGGCTCAGACAGAGAAATAGATGGCCCTTCTTCCAGCACTAGGAATGTTATTAATCAGCAGGATAATAAGCTGTCAGTCTCACGACCTCAAATTCATAAGAGAAAGAAGCTGACAGATTTTAAAGGTGTTTCCAAAGATAATCGATCTTCTTGTTTCATTAGAAATAGTGCTTGTTTGGATTCTGCCAAGGCTACCAAAAGGAGGTTCATGGGAAGAAAGCAGCAGGATTTGAATCTTCTGGGTACTAAAGATTTTCTTGTTAATTCTCTTGGGGTAGTTTTTCCAGATGATGATGAAGACAATCTTGAGCAAAATGCTGCTCGGATGCTGTCATCCAGGTTTGAAACAAGTTGTGCTGGAATATCTTACACCAGGGTCGCATCTTCAAAACCGGTTAAAGAGTCTTCTTTGTTGTTGTCTCCAAGGAATTTAAATGGTGCAGATGCAAATTCCACAGGTAGGGTATTAAGGCCAAGGAAGCATGGTGGCAGAGGTTTTGCAAGGAAGCGACGTCATTTCTATGAAGTATGCTTCAATAACATGGATCCTTATTGGGTTGTCAAACAGAGAATTCGTGTTTTTTGGCCCCTGGACAAGTGTTGGTACTTCGGCCTTGTCAAGGATTATGATCCCGTAACAAAGATGCATCATGTGAAATATGATGACCGTGATGAAGAATGGATAAATCTACAAAATGAGAGATTCAAACTTTTACTTTTTCCAAGTGAGATATCTAGTAATTTTAATCATGAAAGACCAATAGAAGAAGTGAAATTTAGAGGTGAGGAAGAACGTAAAAAGTCCTTGAATGATCTTTCTACAGGAAGTTTAGTGGAATCAGAACCCATCATTTCATGGCTGACTCGTTCTAATCGCCGGAAAAGGCCTGCTCCTGGATTCATAAAGATACAACGGAGAATCTTGCCAGCATCCAATGGTTTCAAAGCTGTGGGCGTACCTAATATTGCGTCAAGTTTATCATCCAGTTTATTGGATGAACCAGCTGAAGATGTCAGCACCCAGAACAGAGTTTTCTCAAATAATAGAAAGCTACCTTTTGTTTATTTTAGAAGACGCACCCGGAAGGATAATGGGCACTTAGGAAACTTCGTGGATAGGAATTTCGTTCATGCATGTTCAGCTGAGCCCATTAGCTTACTTGCTTCTCTTGCTGACACGGAGTTGGCTTTAGAAGAGCTATACATTTCTGCCTTACCAAATTTTTTATCAAATGCTGTTTTAAGGTTGAGCACATCAATCTGGAGCATGTGCCAAAGCAGGCCCGATTCTGACAATATTTTGATGTGCAGAAACTTTTTTCTCTTTAACTACAAGCTGATACAATTATTTCCAATGGTCCGTATGGTGGTAGGTTTCACTGACAATCTGAGTTTAAAACTTTTTTTATTTGAAGGGTGTTTAAGTTGGGCAGTTGCTCTTTTGTGCCAAACATTGAGAGCGAATTTTTTGAATACAAATTTGTGCGCACTATCTGCTGAGAACATATCGTTGAGAAAAATTAGAATTAACATGTCAAACATGCACAACAATGACCAGCAATATCATTTGGTTGTGGATGGCTTCATGGATAGTGATTCAAGATGGAGATTCCTAGAAAAGAAACTTAAAAAACACTGCATCAGGTTCAAGGAATTGTCTCCTTCAGATTGTGCTTATGATAGTATTAGGAGCCTGCCAAAAAGTCGTGCAGGAATACTTGCTCAACTTTTTAAGGAGAATTTTCCAGTTGAGGACATTCCAAAAAGCAAAATTAAGTCTTATTGCATACATGTTGAGGAGTCTGACCAAGTTTCAGATATCACACTTGAGAACTTTGCTTCTTCTAGCACTACAGCTGCTGATTCCAAAATATTTAGTTTTACCCATTTGAGAGTAGATACTGAAGATCCCTCTCTAAGTAATGACGGAGACTGTTTGAAGTCTTCTCATGATTGCTTGAGCATTGAAGTTAATGGTGGTGCATGCTCTGTAGGGCATAGTGGTGTTCGAAAAAACTCAAGGCATGGGATGTCTGTCTCATATCACAAGCTTCCCAAACACACTAGATCTCGTCAAGGTTCCAGGAACTTATGCTCTTTGATTCCTGACGATTCTTCTTCTCCAGATAAGTCTGAAGGTGGGTGCATTTCTAGTTCAAAAACTGCTGGCATCCAGCATCTAAGAGGTACTCGTGCACGGAAGAGAACCAAATTTAATCGGGGGGCGCAAGATACTCACTCAACATCCAATCTACATTGGGAAATGAATGAGGATGATATCCACAGTCCTGACATGACTGCTTCACGACGTGTATGGCATCACGATCAACATAGCTTAGTTTCACCTATATTGGGAACTAGGTTAACTCTTTGGTCAGAAAATTTCATCCAAAATGGATTTCATAGCACAACTAAGAAGCCTCGTACCCAGGTTTCATATCCAGCACTGAGCAGAGGTCTTGATATTAGATCAAAAAACCTGATTTATCACAAAAAAGGTCCACTCTACAAAAGATTGCGTACTGATTTGCCAAAGAAAGTAGTTACTGGTTTGGACAGTCACAGAAACTACCCAGAGTCAATAATTTGCCATGCTAATATTCTTATCACTATTGAAGATCGAGGGTGGAGAGAGTTAGGGGCTGAGGTCATTCTAGACTCTGATGGTCAAAAGATTGTTGTTAAGTTGGCAGGAGCTACAAAGTTCTCTTACAAGGCACACCAGGTTCTGCAGCCTGGTATTCCAAATCGCTATACTCATGCTATGATGTGGAAAGGAGGAAAGGACTGGACTTTGGAATTTACTGATAGGAACCAATGGTTTCTTTTCAAAATGTTACATGGGAAATGCTTCAATCAAAACATAAGGGCTGCCTCTGTTAAGAACATTCCAATACCTGGTGTTCGACTAATTAATGATGAGGATGAGGTCTTTACAGGAGTTCCTTTTGTTCGCAATCCATCAAAGTATTATCAGTTGGTTGGAACTGAAGTTGAGACGGCCTTGGATCCTTCTCATGTGCTCTATGATATGAGTAGTGATGATGAAAAATGGATTTCAAAATATAGAGAAAGTACAACATCTGAAGTGACTGATGATATGTTTGAGCGGGTGATGGATATGTTTGAGAAAGTTGCTTATGTAAAACAATGTGATTGTTTGAATGATGATGAAATAGTGGAAATCATGGAAGATTTTGGCTCATTAGATATAATCAAAGATATTCATAAATTATGGCATGAAAAGAGAAGGAAGAAAGGCATGCCTTTGATTCGACAATACCAGCCTCCCCTTTGGGAATACTACCAACAACAACTGAAAGAATGGGAGCTGGCCATGATAAACTTGCACTGCCCAGCAAATGCGTGTCAAGAGAAGACCACCGCTCCTGAAAAACCTACCATGTTTGCTTTTTGCTTAAAACCTCGAGGTCTGGAAGCTAACAAAGGTTCAAAGCAGAGGTCCCATAAAAAGTTGATGTACGCTGGTCATCACGGTTCATTTTCAAGAGAACTTGATGGACTTCATGCTTTAGGGAGAAGGTTGAATCCGTCCTCAGTCGGGGATGAGAGGACTTTTGTTTCTATTCCTAGTTATGAAGGCTCTCATCCTACTACTCAGTGGCTTCAATCGGCATTGAGTTTCTCGCCAAGGGAAGCAGGAACTGCAATTCTAATGACTAGAGATGGTGTGGATAGAACTCAATATATAAAGTTTTTTAGAAATCTCTCAAAGAAAAATGGAATTCACTCTACTCCTTGGGATTCCTCGATCGCCCTATCATCATGCAGTGAAAAGTCAAAAAGGAATGGAGTTTTCCGTTGGAATTCTGATGTGCTGGACTGGTCAAGCTCTAAGCATTTGCAGTCAGATAGCACTCAAAGGCAGCAGCCAGATATAAATGAGTTCAGGTTGCGCGATGCATCTGGTGCTGCTCAACACGCATCAAATATGGCTAAACTTAAGAGAGAGAAGGCACAATGGTTGATGCATAAAGCAGATCTTGCACTTCACAAGGCTGTTGTTGCAATTATGACTGCAGATGCAATAAAGACATCTCAAAAGGACTTGATTGATGATGAATAA

Network for GWHGAAEX006635

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10513.8	EPL1	1166	1252	3.40E-10

Protein Sequence

>GWHPAAEX006635
MTIVGKLKLRVCGSGLKGKRLVSDVCKRGKQSSSVVLRRLISVSDTSHNIGNVFTMPSGKNGNKLSNDCDLHSTNGLEGSIIITKPRGVPRRQKLFHYFNSGREIVGAASSTRSAADLQSNQRSASRSHVLMPKRRLTEFNEDGSTDKVAFSGMGNSDNLNFVKTTKRRSQSRKGLVSSRGDVRRSNDLEGSIIVTKHPRGVTSRKKIGSDREIDGPSSSTRNVINQQDNKLSVSRPQIHKRKKLTDFKGVSKDNRSSCFIRNSACLDSAKATKRRFMGRKQQDLNLLGTKDFLVNSLGVVFPDDDEDNLEQNAARMLSSRFETSCAGISYTRVASSKPVKESSLLLSPRNLNGADANSTGRVLRPRKHGGRGFARKRRHFYEVCFNNMDPYWVVKQRIRVFWPLDKCWYFGLVKDYDPVTKMHHVKYDDRDEEWINLQNERFKLLLFPSEISSNFNHERPIEEVKFRGEEERKKSLNDLSTGSLVESEPIISWLTRSNRRKRPAPGFIKIQRRILPASNGFKAVGVPNIASSLSSSLLDEPAEDVSTQNRVFSNNRKLPFVYFRRRTRKDNGHLGNFVDRNFVHACSAEPISLLASLADTELALEELYISALPNFLSNAVLRLSTSIWSMCQSRPDSDNILMCRNFFLFNYKLIQLFPMVRMVVGFTDNLSLKLFLFEGCLSWAVALLCQTLRANFLNTNLCALSAENISLRKIRINMSNMHNNDQQYHLVVDGFMDSDSRWRFLEKKLKKHCIRFKELSPSDCAYDSIRSLPKSRAGILAQLFKENFPVEDIPKSKIKSYCIHVEESDQVSDITLENFASSSTTAADSKIFSFTHLRVDTEDPSLSNDGDCLKSSHDCLSIEVNGGACSVGHSGVRKNSRHGMSVSYHKLPKHTRSRQGSRNLCSLIPDDSSSPDKSEGGCISSSKTAGIQHLRGTRARKRTKFNRGAQDTHSTSNLHWEMNEDDIHSPDMTASRRVWHHDQHSLVSPILGTRLTLWSENFIQNGFHSTTKKPRTQVSYPALSRGLDIRSKNLIYHKKGPLYKRLRTDLPKKVVTGLDSHRNYPESIICHANILITIEDRGWRELGAEVILDSDGQKIVVKLAGATKFSYKAHQVLQPGIPNRYTHAMMWKGGKDWTLEFTDRNQWFLFKMLHGKCFNQNIRAASVKNIPIPGVRLINDEDEVFTGVPFVRNPSKYYQLVGTEVETALDPSHVLYDMSSDDEKWISKYRESTTSEVTDDMFERVMDMFEKVAYVKQCDCLNDDEIVEIMEDFGSLDIIKDIHKLWHEKRRKKGMPLIRQYQPPLWEYYQQQLKEWELAMINLHCPANACQEKTTAPEKPTMFAFCLKPRGLEANKGSKQRSHKKLMYAGHHGSFSRELDGLHALGRRLNPSSVGDERTFVSIPSYEGSHPTTQWLQSALSFSPREAGTAILMTRDGVDRTQYIKFFRNLSKKNGIHSTPWDSSIALSSCSEKSKRNGVFRWNSDVLDWSSSKHLQSDSTQRQQPDINEFRLRDASGAAQHASNMAKLKREKAQWLMHKADLALHKAVVAIMTADAIKTSQKDLIDDE

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	133.080
SRP064423	SRR2545915	Juvenile tuber	106.610
SRP108465	SRR5643513	five period of Gastrodia elata	36.040
	SRR5643514	five period of Gastrodia elata	33.780
	SRR5643515	five period of Gastrodia elata	30.130
	SRR5643524	five period of Gastrodia elata	31.930
	SRR5643525	five period of Gastrodia elata	40.450
	SRR5643528	five period of Gastrodia elata	33.910
	SRR5643658	five period of Gastrodia elata	42.370
	SRR5643659	five period of Gastrodia elata	41.160
	SRR5643660	five period of Gastrodia elata	50.630
	SRR5643661	five period of Gastrodia elata	36.730
	SRR5643662	five period of Gastrodia elata	40.300
	SRR5643663	five period of Gastrodia elata	44.780
	SRR5643664	five period of Gastrodia elata	53.360
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	45.190
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	35.940
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	35.540
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	60.620
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	59.760
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	67.650
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	52.250
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	53.500
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	31.460
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	35.440
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	28.650
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	28.650
SRP279888	Gastro	Gastrodia elata tuber	46.42
	Juven	Juvenile tuber	56.42
	Mother_Gastro	Mother tuber of Gastrodia elata	27.62
	Mother_Juven	Mother tuber of Juvenile	47.63