Detail information of GWHGAAEX006652/evm.TU.scaffold_188.28
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15605541|ref|NP_220327.1| | 1.00E-70 | Glycerol-3-P Acyltransferase [Chlamydia trachomatis D/UW-3/CX] |
| nr | gi|672160567|ref|XP_008800067.1| | 0 | PREDICTED: glycerol-3-phosphate acyltransferase, chloroplastic [Phoenix dactylifera] |
| Swissprot | tr|Q39639|PLSB_CUCSA | 0 | Glycerol-3-phosphate acyltransferase, chloroplastic (Precursor) |
| trEMBL | tr|Q9M4V1|Q9M4V1_ELAGV | 0 | Glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AAF64066.1} |
| TAIR | AT1G32200 | 0 | phospholipid/glycerol acyltransferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000191 | 652600 | 713686 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006652
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF14829.5 | GPAT_N | 79 | 163 | 8.60E-28 |
| PF01553.20 | Acyltransferase | 208 | 345 | 7.20E-14 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00630 | ATS1 | Metabolic pathways | map01100 |
| Glycerolipid metabolism | map00561 | ||
| Glycerophospholipid metabolism | map00564 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006650 | Biological Process | glycerophospholipid metabolic process |
| GO:0004366 | Molecular Function | glycerol-3-phosphate O-acyltransferase activity |
| GO:0016746 | Molecular Function | transferase activity, transferring acyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.040 |
| SRR2545915 | Juvenile tuber | 10.660 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 6.030 |
| SRR5643514 | five period of Gastrodia elata | 6.440 | |
| SRR5643515 | five period of Gastrodia elata | 7.370 | |
| SRR5643524 | five period of Gastrodia elata | 7.040 | |
| SRR5643525 | five period of Gastrodia elata | 6.480 | |
| SRR5643528 | five period of Gastrodia elata | 8.930 | |
| SRR5643658 | five period of Gastrodia elata | 7.330 | |
| SRR5643659 | five period of Gastrodia elata | 5.970 | |
| SRR5643660 | five period of Gastrodia elata | 7.380 | |
| SRR5643661 | five period of Gastrodia elata | 6.070 | |
| SRR5643662 | five period of Gastrodia elata | 5.940 | |
| SRR5643663 | five period of Gastrodia elata | 7.580 | |
| SRR5643664 | five period of Gastrodia elata | 5.870 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 7.840 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.250 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 5.010 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.890 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 5.890 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.660 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.870 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.910 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 7.760 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 8.610 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 7.060 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 7.060 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.79 |
| Juven | Juvenile tuber | 6.97 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 14.81 | |
| Mother_Juven | Mother tuber of Juvenile | 16.35 |