Detail information of GWHGAAEX006666/evm.TU.scaffold_188.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG23899.00E-26Predicted bromodomain transcription factor
nrgi|743779232|ref|XP_010920080.1|2.59E-42PREDICTED: transcription initiation factor TFIID subunit 8-like [Elaeis guineensis]
Swissprottr|Q9SYZ9|TAF8_ARATH5.00E-26Transcription initiation factor TFIID subunit 8
trEMBLtr|Q6Z8D5|Q6Z8D5_ORYSJ2.00E-36Putative uncharacterized protein P0459B01.33 {ECO:0000313|EMBL:BAD07884.1}
TAIRAT3G021609.00E-26Bromodomain transcription factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019114894191490644-
Transcript Sequence

Network for GWHGAAEX006666

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07524.12Bromo_TP18825.80E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14649TAF8 Basal transcription factors map03022

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.870
SRR2545915Juvenile tuber2.400
SRP108465SRR5643513five period of Gastrodia elata10.670
SRR5643514five period of Gastrodia elata8.870
SRR5643515five period of Gastrodia elata13.650
SRR5643524five period of Gastrodia elata7.450
SRR5643525five period of Gastrodia elata8.660
SRR5643528five period of Gastrodia elata16.700
SRR5643658five period of Gastrodia elata15.820
SRR5643659five period of Gastrodia elata8.490
SRR5643660five period of Gastrodia elata5.160
SRR5643661five period of Gastrodia elata5.440
SRR5643662five period of Gastrodia elata10.010
SRR5643663five period of Gastrodia elata5.940
SRR5643664five period of Gastrodia elata15.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.940
SRR6049655Rhizomagastrodiae_C368-T10_good_111.010
SRR6049656Rhizomagastrodiae_C368-T07_good_17.720
SRR6049657Rhizomagastrodiae_C368-T07_good_16.360
SRR6049658Rhizomagastrodiae_C368-T04_good_16.690
SRR6049659Rhizomagastrodiae_C368-T04_good_14.750
SRR6049660Rhizomagastrodiae_C368-T01_good_16.550
SRR6049661Rhizomagastrodiae_C368-T04_good_14.500
SRR6049662Rhizomagastrodiae_C368-T01_good_13.850
SRR6049663Rhizomagastrodiae_C368-T01_good_14.590
SRR6049664Rhizomagastrodiae_C368-T10_good_19.330
SRR6049665Rhizomagastrodiae_C368-T10_good_19.330
SRP279888GastroGastrodia elata tuber 7.75
JuvenJuvenile tuber11.39
Mother_GastroMother tuber of Gastrodia elata 23.61
Mother_JuvenMother tuber of Juvenile 18.16