Detail information of GWHGAAEX006679/evm.TU.scaffold_189.18
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1021 | 9.00E-51 | Acetylglucosaminyltransferase EXT1/exostosin 1 |
| nr | gi|695002399|ref|XP_009379859.1| | 9.30E-68 | PREDICTED: exostosin-1 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9C975|GT643_ARATH | 3.00E-51 | Glycosyltransferase family protein 64 C3 {ECO:0000303|PubMed:24905498} (Precursor) |
| trEMBL | tr|J3MUI0|J3MUI0_ORYBR | 2.00E-71 | Uncharacterized protein {ECO:0000313|EnsemblPlants:OB08G27610.1} |
| TAIR | AT1G80290 | 9.00E-51 | Nucleotide-diphospho-sugar transferases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000188 | 824403 | 825299 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006679
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF09258.9 | Glyco_transf_64 | 30 | 275 | 3.30E-49 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT64 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016757 | Molecular Function | transferase activity, transferring glycosyl groups |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.680 |
| SRR2545915 | Juvenile tuber | 0.660 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.370 |
| SRR5643514 | five period of Gastrodia elata | 7.090 | |
| SRR5643515 | five period of Gastrodia elata | 7.060 | |
| SRR5643524 | five period of Gastrodia elata | 8.300 | |
| SRR5643525 | five period of Gastrodia elata | 10.770 | |
| SRR5643528 | five period of Gastrodia elata | 9.560 | |
| SRR5643658 | five period of Gastrodia elata | 13.300 | |
| SRR5643659 | five period of Gastrodia elata | 4.820 | |
| SRR5643660 | five period of Gastrodia elata | 2.960 | |
| SRR5643661 | five period of Gastrodia elata | 6.380 | |
| SRR5643662 | five period of Gastrodia elata | 5.010 | |
| SRR5643663 | five period of Gastrodia elata | 7.560 | |
| SRR5643664 | five period of Gastrodia elata | 3.520 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 5.810 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.570 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.610 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 7.130 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.450 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 6.780 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.400 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 7.710 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 7.670 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.320 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.320 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.90 |
| Juven | Juvenile tuber | 2.44 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.98 | |
| Mother_Juven | Mother tuber of Juvenile | 2.90 |