Gene detail

Detail information of GWHGAAEX006689/evm.TU.scaffold_189.30

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|15679629\|ref\|NP_276746.1\|	3.00E-44	transcriptional control factor (enhancer-binding protein) [Methanothermobacter thermautotrophicus str. Delta H]
KOG	KOG1801	0	tRNA-splicing endonuclease positive effector (SEN1)
nr	gi\|743804459\|ref\|XP_010927195.1\|	0	PREDICTED: uncharacterized protein LOC105049290 [Elaeis guineensis]
Swissprot	tr\|B6SFA4\|MAA3_ARATH	7.00E-72	Probable helicase MAGATAMA 3
trEMBL	tr\|A0A061GGV8\|A0A061GGV8_THECC	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative {ECO:0000313\|EMBL:EOY26274.1}
TAIR	AT1G16800	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000188	1373303	1424194	-

Transcript Sequence
>GWHTAAEX006689 ATGCTCTTTATGTTTTCAGATTGCTATGCATTTTTATTCAATTTACCGGAAGAAAGCCATATATGGTGCGGCTATTCAGATTTAATGGGACCGCTCTTGGAGACTTTTCATAATTACTTCAACGACAAGAGTAATGATTCACCTTTGAAGCTTTTGTGGAAGAGAATTTCTGTGGAATTGGAACAGTGCACACAATGTATTTTCTTGTATCATCAGGCTCAAGAGTTATATAACCTTGAGTATGAATTCGATGCTGTTGGCCAGCTTCTGAAAGTGTTACGTAGACTTGATGAAGAAAGGGTCACTGAGCATATAGAGAAGATAAATGCAAGGATGAAACATGGAGAATATAATGCAGATGCCTATAATGCTGAAGTTATTAGCTTAATGTTTGAAGTTTTGACATATCCCATACTTCTAGAAGATCAGATTTTGGTTAAGGAGTTCCAAGTTTTTCTTGAAGCAGTTGATAGCTATCATGATGTCGCTTTAGCTGGTAGTCAACAATATATGGGTGTTTATGCTCTTCTTTTTCTTAAAAGTGGAAGAGCTAGGGCAATTGGTTTTCGTTTAGCTGGATGCATGGAAAAGTTGAGGAGTGCAGCAGATTTGGATCCTTTGCAGCCTCTTTTAAGGAAAAACATTGGCTTTTTGGGAAATGAGGTTCTTCCGTCCACTTTGGATGATTCAAGACCAAGAGTACTGCTCGAGCGGACGACTGTATGGATTGGTGTAAAAACTCTACTCGGATTTCTTGAGGCCCCAGCATATGAAGAAGGAATATTGGAGAAGTATCCTGTTTTCTTGAGCATTGTTCTTAACCATGTCAGCGGTGACACACTGGATTTTTCTTATGCTGTTGCTTGTTTGAGAATATCGTTTGAAATTCTCGGGAGTAAACTTTGGCAGAGAACTGCTTTATCACCCAGTGTGATGCGTAACACTCTTTTGGGCCAGTGCTTTCACACCCGAATTGAGAAGAGCCACAAAGAGATTTTTGATCTTTTTCTCCCATTTTTGCAGTCTCTTGAAGCTTACCTGGATGGCGAGCATGAAAAACAGAGAAGGAATTTACTGTATTTTCTTTTGCATCAAGTAACTCAGAGCAGTAACTTCAGTGATCTAATGAGGAAGAATGCTCGCAAGATAGCACTTCTAATTGTACATCGCGGATACAAAATGGTTCCTCCGTGCCCACCTTTTGAATGTGCACATATGTGGGGTCCAACATTGGTGAATTCCTTCAAAAACATGTCCTTGCATAATTCTCTGCGTCAGCCAGCCTTTGATCTTATCACAACAATCATAATTTCTGATGCATCCGCTCTGATATCTCTTAAGCAGAAGATTAGTACCGTGTATAAAAGTAATTTGACCATCCAAGGTTACTTAGTTGATGAAGAAAACGAGTTCACTTTCTCTGAAGATGTAGAAGAAAATGATAACAGTTGTTGGGCTGAATTTAACATGCAAAGCAAGCTTGCTTCGTCTGAATCTTCATGTTGGGTGTGCATTCCAATGTTATGGATTGATTCTTTGATTGACATTGACCCTGCAATTCTTCCCATATCTTTTTCGAAAGCTCTTTTCTGGGTTTTGTCACATATATCTGTTTTGGAAATGAATTCCTCTGTAGATATGTCACTTGCAGTTCGGGACTGGTTGTCTATACATGCCAGTGAGATCTCTTCATCATTTGGGTGGCAGATTCCAACTGGTTTTAATGATGGAGGGGAAGGGAAGGAATCTAGAAATTCTGTTAGGGCATCATCTTTGTGCACTCCATTGCTACGGGCATTAAAGAGGCTTGCTGCTGAATTTATCTTGCAACTGGAAAAAATTGAGCTTCACAAGCAATGGACGTGGGAACCAAGAATGGCTGAGAGCTTGATACTTTCGCTTGTTGATCCTGATGATATTGTGAGGAAAACTGGTAAAATTATCTTGGAGCAGTTGTCCAATGAGCGTCTCTTGACTTCTGAACTCCAGTTTCTTTGCTCCACATCATCTTCTATGTCAGCCATGCTTATCGGCTTGCAGTTCATGTTTAAACAGGTTCATTGTTATTCCATGATGGATAGTTTTCATTGCCTTCACCATGTGTTTTTTGTAACGGGGAAACTACTAAAGGAACTTGTAAGATCTCCAATAAAAGCGCCTCCTATTTCTCTGTCTTCTCAGGGAGGGTTTTTACCGGAATCTCTTACTGATCATGTGCCATCTAGTCCTTGTGAATGTCAACAAAATCAGGTGAACATTAAATCTTGGGAGAAATTTAGTTGCTTGCTTTCTGCGACCATGTGGGCTCCCGTATTAAAATGCCTAGTGGAAGGAAAAGAGTTTATAAATAACACGAAATGTCAGATGACATGTGTACGGTTGCTGGAAACATTCCCTGCTATTTTTGAAAGGCTTAGCTTATCTATGCCCAATTTGTCAGGAAGTATAGTGCATCTAGTTCCTAGTTTGTCTGACTTCAAATGGCTTTCAGATTTGGTAGATTGGCGTAGATCACATTTGGTTGTTGTCATCAGGCACTGGAAACAATGCATGCTTTCTTTGTTGAGCATTTTTAAAGAATTATGTGGTGATTTGGCAGCATCCATGATAAGTACCATAGAAAAAATTATACCATCTGATACAATTATACTTGATTATATACAGGAGCAGATGCTTTGCCTTATATCATCTTTGTCTCATCTTTATTCTTCCTGGGATGGTAGACAAATAATCAAGCCTGTAGAAACTTTTTCATGGAAAAAAGTGCCAGATTTAGGTGCATCTTTGTTTCTTGGTTCAAGTTCGAATTCTAGTGCGCTTATGAATGAGAAATCTATAGAGAAAGAAATCGTTGTTCTTTCAGATGATGAAGCTGATAATGAGGCTTGCATGGAGGTGGTAGCCTCATGCTGCACTAACTCAGCTTTACATTTGCACGAGGGTTTTCTTCCAGCTATGAGTAAGGGCTTATTACTAGATGATGACAAGGACTCCATGATTGCTAATTCTAAGCGTGATATACTTGAGCCATTTCCTTCTGGAATTTTTGTTAAGGACGATGTGTGTTCTTCTGAGGAAGAGGACCAGCTTGTAATTAAGAAATCAACTTCTAGTAAGGAGTCTGTTGCCAGTAGAATTGGAGGTTTCCATATGCAAGAAAGAGATCATAGTACAGAAGCCTTCAAAAGTAGTAGCCTTGTTAAGTCTTCTCACAAAACTACAAATGCTAGTTCCAAAAATTGTGTGTCATTGCCAAAAATTCCTTCCCGCAAGGTAAGTAACACTGTTCCATGCTCGGATCAAACCACTGCTATGGTCAAAAAGTTAGTTCGGGACATTGGCAATCCTTTGGAACTTGCACTTGACAAAATCAGCCGTCCAAAACCAGCAGTATCAAAGCTAACTGTATTTGCTCCTAAAAGAAAAGTAATTCAACTCCAAATGCCTGAAAATAATAAATCTTGCTCATTTAATAGAATGGACATATCTTCCAGAAGGCTTAAACCTCCTAAATTGGATGTTTGGTATAAATCCATTTTAGAAATGGATTACTTTGTGACAGTGGGACTGCAGGCTGCAGACGAAAATGAAAAGACAACCTCAAAATTGACTGAAGTTCCTTTGCATTTCCAATCTTCAGATCAATATGTTAAAATATTTCAACCATTAGTTTTGGAAGAGTTCAAAGCGCAGTTGCGCAATTCATTTTTGGAGTCACCTGTAGATGACAAGCATTGTAGTAGTCTCTCTGTGGTTTCGGTGGAAAGGATTGATGATTTTCATATGATTCGTGGTCGTCCCAATGAGAAAGAATCTACAACATCCATAGGATGTATAGAAAATGATCTGGTGCTGCTCACAAAAGATCCTCCGGAGACTTCCGTTCAAAATAATTATGTTCTTGGAAAGGTGGAAAGACGTGAGAAGAGTGACAAAAAGTTTTCAGTTATTCTAGTAATTAGATTTTATCTTCCAGATGCTTCCTCACGTCTAAATAAAGTTAAGAGGCTTCTGATTGAACGGAGTAAATGGTTTTTAAGTCGAGTTATGAGCCTGACTCCACAACTAAGAGAATTTCAGGCTCTTTCATCTCTCAATGCAATTCCTATGCTTCATATTATCTTGAATCCTGTTGATCATTCTTATGGGCATGCTGAAGTACAAAAAGTGAACCTAAGTAAGCTCTCTCAGCCCATGCAAAACATGCTAAAGTCATCTTTTAATGACAGTCAGCTCCAGGCTGTTAGTGTTGCCATCAGATCACAAGCTTCAAAAAAGTTTGAACTGTCACTTATCCAGGGTCCTCCAGGAACTGGTAAGACCAGAACTATTGTTGCTATTGTTAGTGCACTTCTTGCTTTGCAAAGAGTCTCTAAAAACTGTTCATCTAACATGCCGACCAATACTACTAGAGCGGCTAATGTCTTGTCAAATCCTGTTGCACATCTTACCCATACTGCAACAATTGCAAGAGCTTGGCAAGATGCAACTTGTGCAAAACAATTGCTCAAGGATGCAGAGAAAGCTTCTTCTATACCTGTAGATTGTGCTTCAAAAGGAAGGGTCCTTATCTGTGCACAGTCAAATGCAGCAGTTGATGAACTTGTATCAAGAATTAATGAAGGGATTTATGGGAATGATGGAAAGATGTACAAACCTTTTATTGTGAGAGTTGGCAATGCAAAAACTGTACATCCTGATTCCTTACCTTTTTTTATTGACACATTAGTTGAATTACGGCTGGCTGAAGAAATAACAACCACGGGAACAGTTGGAGGAGGAAATGATTCTATTGCCGAGACTTCAATTTCACTACGCTTTAAATTAGAGAAGCTAGTTGAAAGAATCCGGTACTATGAGTCTAAGCGGGCTAAATCGAAAGACGGGGATGCCAACTTGAAGGATACCTCTGGTAATGATATTTCTAAGGAGGATGATAACAAAGAAGTGTCTGATGCCTCAATTGGGGCAAAACTGAACAATTTGTACAGGGAGAAAAGATTAATTTATCAAGATCTTCTATCCTCTCAGGCTCAAGAAAAGAAGATAACTGAAGAAAGTAGGGCTCGTAAACATAAGATTCGGAAATCCATTTTAAGAGAGGCTGAGATTGTGATAACTACGCTTAGTGGGTGCGGTGGTGATCTATATGGAGTTTGCTATGGGTCTACTTCAAGCGGGAATTCAGGAAGGCTTACTGACCAGTTTTTCTTTGATGTAGTTGTAATTGATGAAGCAGCCCAAGCTCTTGAACCTGCAACTCTCATACCACTTCAGCTTTTGAAGTCAAATGGAGCCAAATGTATAATGGTTGGGGATCCAAAACAGCTTCCTGCTACTGTACTTTCTAGTGTGGCCAGTCAATTTTTATATGAGTGCAGCATGTTTGAAAGATTGCAAAAGGCTGGGCATCCAGTTATATTGTTAACTGAACAGTATAGAATGCATCCGGAGATCTGCAGTTTTCCATCATTACACTTTTATGATAACAAGCTACGAAACGGTATCAGTGCGGCAAGCAAATCTGCTCAATTTCATGAACATGCTTATCTCGGTCCTTACACGTTCTATGATATTGTTGATGGCTGTGAGTACCATGGCAAAAGCTCTAGTTCTTTATCACTTTATAATAAGGCTGAGGTTGAGGCAGCCATCAGCATCATGAGGTCCTTACGGAAGAGATACACCTCTGACTTCACCTCCAGAAAGATAGGGATCATAACTCCTTACAAGAGCCAACTTCAATTGCTACGGTCTCATTTTTCCAGTGCATTCGGGTCGAGCGCTCTCTACGACATGCAGTTCAACACGGTGGACGGATTTCAAGGCCGCGAAGTCGACATCTTGCTACTGTCGACCGTCCGATCTTCCATCTCCGTCTCTAAATCCGCGGCCGGCATCGGCTTTGTCGCTGATATCAGACGCATGAATGTAGCCTTAACGCGAGCGAAAATATCTCTTTGGATAGTTGGCAATGCCCGAACTTTGCAGACAAATCCCCATTGGGCCGCTCTGATCCAGAATGCCAAAGAAAGAAACTTGTTCGTCTCAGTCCACAGGCCTTATGAGTCATTGTTCAAGGAGTCGGCGAACAAGAATGACATGGCCAAATCTAGCCAAGAAGAAACTGAGCAAGACGAAGACAGAGATGCCTTCGGAAAGAAGGCCAAGTTTGCAAAGAGATTTGGACTGGCTGCTTCTGAAGGAATCAGCAGAGTGACAAATGCCAAGCAGAGAGATGGCTTGGCAAAGACCTTGCAGAAGAGCTCCAATTGCAGCAGAGAAGGGGAAAAAGCTTCATTGAAGGAAAAGGCAGTCGAGAAGGTCTCTGCAAATGCCGCTGTGAGGAATAGAGCATGCGAAAATACGTCAGAAAAATTCCAACGAGAAGCTGATAAAGAAAAGCCCCCCAAACCATTGGCGAAGGATTTGCTGGCAATTAGAAAACGGCAGCGTGATGACATCGAGGCACTCCTGCCATCAGCCCTAATTTCTTCTTCTAAGAAAACTGGAAAGCCATCGTCAAGTTCTCCCGCCCTAAAAAAACCTCGCAATTGA

Network for GWHGAAEX006689

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13086.5	AAA_11	1407	1783	7.20E-59
PF13087.5	AAA_12	1791	1993	4.30E-60

Protein Sequence

>GWHPAAEX006689
MLFMFSDCYAFLFNLPEESHIWCGYSDLMGPLLETFHNYFNDKSNDSPLKLLWKRISVELEQCTQCIFLYHQAQELYNLEYEFDAVGQLLKVLRRLDEERVTEHIEKINARMKHGEYNADAYNAEVISLMFEVLTYPILLEDQILVKEFQVFLEAVDSYHDVALAGSQQYMGVYALLFLKSGRARAIGFRLAGCMEKLRSAADLDPLQPLLRKNIGFLGNEVLPSTLDDSRPRVLLERTTVWIGVKTLLGFLEAPAYEEGILEKYPVFLSIVLNHVSGDTLDFSYAVACLRISFEILGSKLWQRTALSPSVMRNTLLGQCFHTRIEKSHKEIFDLFLPFLQSLEAYLDGEHEKQRRNLLYFLLHQVTQSSNFSDLMRKNARKIALLIVHRGYKMVPPCPPFECAHMWGPTLVNSFKNMSLHNSLRQPAFDLITTIIISDASALISLKQKISTVYKSNLTIQGYLVDEENEFTFSEDVEENDNSCWAEFNMQSKLASSESSCWVCIPMLWIDSLIDIDPAILPISFSKALFWVLSHISVLEMNSSVDMSLAVRDWLSIHASEISSSFGWQIPTGFNDGGEGKESRNSVRASSLCTPLLRALKRLAAEFILQLEKIELHKQWTWEPRMAESLILSLVDPDDIVRKTGKIILEQLSNERLLTSELQFLCSTSSSMSAMLIGLQFMFKQVHCYSMMDSFHCLHHVFFVTGKLLKELVRSPIKAPPISLSSQGGFLPESLTDHVPSSPCECQQNQVNIKSWEKFSCLLSATMWAPVLKCLVEGKEFINNTKCQMTCVRLLETFPAIFERLSLSMPNLSGSIVHLVPSLSDFKWLSDLVDWRRSHLVVVIRHWKQCMLSLLSIFKELCGDLAASMISTIEKIIPSDTIILDYIQEQMLCLISSLSHLYSSWDGRQIIKPVETFSWKKVPDLGASLFLGSSSNSSALMNEKSIEKEIVVLSDDEADNEACMEVVASCCTNSALHLHEGFLPAMSKGLLLDDDKDSMIANSKRDILEPFPSGIFVKDDVCSSEEEDQLVIKKSTSSKESVASRIGGFHMQERDHSTEAFKSSSLVKSSHKTTNASSKNCVSLPKIPSRKVSNTVPCSDQTTAMVKKLVRDIGNPLELALDKISRPKPAVSKLTVFAPKRKVIQLQMPENNKSCSFNRMDISSRRLKPPKLDVWYKSILEMDYFVTVGLQAADENEKTTSKLTEVPLHFQSSDQYVKIFQPLVLEEFKAQLRNSFLESPVDDKHCSSLSVVSVERIDDFHMIRGRPNEKESTTSIGCIENDLVLLTKDPPETSVQNNYVLGKVERREKSDKKFSVILVIRFYLPDASSRLNKVKRLLIERSKWFLSRVMSLTPQLREFQALSSLNAIPMLHIILNPVDHSYGHAEVQKVNLSKLSQPMQNMLKSSFNDSQLQAVSVAIRSQASKKFELSLIQGPPGTGKTRTIVAIVSALLALQRVSKNCSSNMPTNTTRAANVLSNPVAHLTHTATIARAWQDATCAKQLLKDAEKASSIPVDCASKGRVLICAQSNAAVDELVSRINEGIYGNDGKMYKPFIVRVGNAKTVHPDSLPFFIDTLVELRLAEEITTTGTVGGGNDSIAETSISLRFKLEKLVERIRYYESKRAKSKDGDANLKDTSGNDISKEDDNKEVSDASIGAKLNNLYREKRLIYQDLLSSQAQEKKITEESRARKHKIRKSILREAEIVITTLSGCGGDLYGVCYGSTSSGNSGRLTDQFFFDVVVIDEAAQALEPATLIPLQLLKSNGAKCIMVGDPKQLPATVLSSVASQFLYECSMFERLQKAGHPVILLTEQYRMHPEICSFPSLHFYDNKLRNGISAASKSAQFHEHAYLGPYTFYDIVDGCEYHGKSSSSLSLYNKAEVEAAISIMRSLRKRYTSDFTSRKIGIITPYKSQLQLLRSHFSSAFGSSALYDMQFNTVDGFQGREVDILLLSTVRSSISVSKSAAGIGFVADIRRMNVALTRAKISLWIVGNARTLQTNPHWAALIQNAKERNLFVSVHRPYESLFKESANKNDMAKSSQEETEQDEDRDAFGKKAKFAKRFGLAASEGISRVTNAKQRDGLAKTLQKSSNCSREGEKASLKEKAVEKVSANAAVRNRACENTSEKFQREADKEKPPKPLAKDLLAIRKRQRDDIEALLPSALISSSKKTGKPSSSSPALKKPRN

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.720
SRP064423	SRR2545915	Juvenile tuber	14.370
SRP108465	SRR5643513	five period of Gastrodia elata	5.690
	SRR5643514	five period of Gastrodia elata	6.360
	SRR5643515	five period of Gastrodia elata	6.480
	SRR5643524	five period of Gastrodia elata	5.770
	SRR5643525	five period of Gastrodia elata	4.960
	SRR5643528	five period of Gastrodia elata	3.630
	SRR5643658	five period of Gastrodia elata	4.310
	SRR5643659	five period of Gastrodia elata	8.410
	SRR5643660	five period of Gastrodia elata	9.760
	SRR5643661	five period of Gastrodia elata	7.990
	SRR5643662	five period of Gastrodia elata	7.700
	SRR5643663	five period of Gastrodia elata	8.370
	SRR5643664	five period of Gastrodia elata	8.850
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.370
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.890
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.440
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.370
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.630
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.130
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.920
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.000
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.570
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.290
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.290
SRP279888	Gastro	Gastrodia elata tuber	11.52
	Juven	Juvenile tuber	12.99
	Mother_Gastro	Mother tuber of Gastrodia elata	7.91
	Mother_Juven	Mother tuber of Juvenile	8.78