Detail information of GWHGAAEX006697/evm.TU.scaffold_19.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17213.00E-77FOG: Zn-finger
nrgi|657986722|ref|XP_008385495.1|5.05E-82PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like isoform X2 [Malus domestica]
Swissprottr|Q9C8N5|STOP1_ARATH6.00E-64Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
trEMBLtr|M7YAV3|M7YAV3_TRIUA7.00E-82Zinc finger protein STOP1-like protein {ECO:0000313|EMBL:EMS47263.1}
TAIRAT5G228903.00E-77C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000020964510781-
Transcript Sequence

Network for GWHGAAEX006697

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.510
SRR2545915Juvenile tuber0.490
SRP108465SRR5643513five period of Gastrodia elata2.760
SRR5643514five period of Gastrodia elata4.640
SRR5643515five period of Gastrodia elata6.140
SRR5643524five period of Gastrodia elata4.870
SRR5643525five period of Gastrodia elata0.530
SRR5643528five period of Gastrodia elata0.150
SRR5643658five period of Gastrodia elata0.060
SRR5643659five period of Gastrodia elata0.500
SRR5643660five period of Gastrodia elata0.610
SRR5643661five period of Gastrodia elata0.490
SRR5643662five period of Gastrodia elata0.270
SRR5643663five period of Gastrodia elata0.730
SRR5643664five period of Gastrodia elata0.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.050
SRR6049655Rhizomagastrodiae_C368-T10_good_16.040
SRR6049656Rhizomagastrodiae_C368-T07_good_17.590
SRR6049657Rhizomagastrodiae_C368-T07_good_12.140
SRR6049658Rhizomagastrodiae_C368-T04_good_12.280
SRR6049659Rhizomagastrodiae_C368-T04_good_12.620
SRR6049660Rhizomagastrodiae_C368-T01_good_11.540
SRR6049661Rhizomagastrodiae_C368-T04_good_12.660
SRR6049662Rhizomagastrodiae_C368-T01_good_11.050
SRR6049663Rhizomagastrodiae_C368-T01_good_12.330
SRR6049664Rhizomagastrodiae_C368-T10_good_111.810
SRR6049665Rhizomagastrodiae_C368-T10_good_111.810
SRP279888GastroGastrodia elata tuber 0.33
JuvenJuvenile tuber0.21
Mother_GastroMother tuber of Gastrodia elata 5.06
Mother_JuvenMother tuber of Juvenile 4.01