Detail information of GWHGAAEX006704/evm.TU.scaffold_19.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743853074|ref|XP_010940561.1|3.39E-91PREDICTED: transcription elongation factor SPT5 [Elaeis guineensis]
trEMBLtr|K3YNE5|K3YNE5_SETIT3.00E-78Uncharacterized protein {ECO:0000313|EnsemblPlants:Si015786m}
TAIRAT5G239501.00E-41Calcium-dependent lipid-binding (CaLB domain) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000020251064252479-
Transcript Sequence

Network for GWHGAAEX006704

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00168.29C271081.30E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms120.290
SRR2545915Juvenile tuber114.380
SRP108465SRR5643513five period of Gastrodia elata468.360
SRR5643514five period of Gastrodia elata444.480
SRR5643515five period of Gastrodia elata424.220
SRR5643524five period of Gastrodia elata472.010
SRR5643525five period of Gastrodia elata561.210
SRR5643528five period of Gastrodia elata890.070
SRR5643658five period of Gastrodia elata501.920
SRR5643659five period of Gastrodia elata335.130
SRR5643660five period of Gastrodia elata410.230
SRR5643661five period of Gastrodia elata399.320
SRR5643662five period of Gastrodia elata380.530
SRR5643663five period of Gastrodia elata344.420
SRR5643664five period of Gastrodia elata346.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1354.890
SRR6049655Rhizomagastrodiae_C368-T10_good_1495.310
SRR6049656Rhizomagastrodiae_C368-T07_good_1351.050
SRR6049657Rhizomagastrodiae_C368-T07_good_1335.970
SRR6049658Rhizomagastrodiae_C368-T04_good_1317.830
SRR6049659Rhizomagastrodiae_C368-T04_good_1342.810
SRR6049660Rhizomagastrodiae_C368-T01_good_1308.190
SRR6049661Rhizomagastrodiae_C368-T04_good_1266.840
SRR6049662Rhizomagastrodiae_C368-T01_good_1379.240
SRR6049663Rhizomagastrodiae_C368-T01_good_1423.960
SRR6049664Rhizomagastrodiae_C368-T10_good_1511.140
SRR6049665Rhizomagastrodiae_C368-T10_good_1511.140
SRP279888GastroGastrodia elata tuber 537.40
JuvenJuvenile tuber743.69
Mother_GastroMother tuber of Gastrodia elata 1,311.26
Mother_JuvenMother tuber of Juvenile 1,562.61