Detail information of GWHGAAEX006711/evm.TU.scaffold_19.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00484.00E-68Transcription factor, Myb superfamily
nrgi|743835014|ref|XP_010935699.1|1.56E-83PREDICTED: transcription factor RAX2-like [Elaeis guineensis]
Swissprottr|Q9SJL7|RAX2_ARATH4.00E-67Transcription factor RAX2
trEMBLtr|B9HQM8|B9HQM8_POPTR1.00E-75Uncharacterized protein {ECO:0000313|EMBL:EEE88254.1}
TAIRAT5G576204.00E-68myb domain protein 36

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000020680777708440+
Transcript Sequence

Network for GWHGAAEX006711

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14824.90E-10
PF00249.30Myb_DNA-binding891312.00E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.330
SRR2545915Juvenile tuber5.070
SRP108465SRR5643513five period of Gastrodia elata4.780
SRR5643514five period of Gastrodia elata2.700
SRR5643515five period of Gastrodia elata3.230
SRR5643524five period of Gastrodia elata3.380
SRR5643525five period of Gastrodia elata1.220
SRR5643528five period of Gastrodia elata1.120
SRR5643658five period of Gastrodia elata0.260
SRR5643659five period of Gastrodia elata1.750
SRR5643660five period of Gastrodia elata1.360
SRR5643661five period of Gastrodia elata1.380
SRR5643662five period of Gastrodia elata0.370
SRR5643663five period of Gastrodia elata0.470
SRR5643664five period of Gastrodia elata0.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.720
SRR6049655Rhizomagastrodiae_C368-T10_good_16.820
SRR6049656Rhizomagastrodiae_C368-T07_good_17.670
SRR6049657Rhizomagastrodiae_C368-T07_good_16.540
SRR6049658Rhizomagastrodiae_C368-T04_good_14.640
SRR6049659Rhizomagastrodiae_C368-T04_good_12.980
SRR6049660Rhizomagastrodiae_C368-T01_good_12.200
SRR6049661Rhizomagastrodiae_C368-T04_good_15.230
SRR6049662Rhizomagastrodiae_C368-T01_good_16.890
SRR6049663Rhizomagastrodiae_C368-T01_good_13.260
SRR6049664Rhizomagastrodiae_C368-T10_good_15.330
SRR6049665Rhizomagastrodiae_C368-T10_good_15.330
SRP279888GastroGastrodia elata tuber 0.21
JuvenJuvenile tuber0.14
Mother_GastroMother tuber of Gastrodia elata 0.02
Mother_JuvenMother tuber of Juvenile 0.03