Detail information of GWHGAAEX006712/evm.TU.scaffold_19.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|78044349|ref|YP_360436.1|3.00E-120acetyl-CoA acetyltransferase [Carboxydothermus hydrogenoformans Z-2901]
KOGKOG138903-oxoacyl CoA thiolase
nrgi|720086889|ref|XP_010243983.1|0PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal [Nelumbo nucifera]
Swissprottr|Q56WD9|THIK2_ARATH03-ketoacyl-CoA thiolase 2, peroxisomal (Precursor)
trEMBLtr|M0U686|M0U686_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP04240_001}
TAIRAT2G331500peroxisomal 3-ketoacyl-CoA thiolase 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000020735299757601-
Transcript Sequence

Network for GWHGAAEX006712

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00108.22Thiolase_N503051.80E-76
PF02803.17Thiolase_C3144363.00E-47
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K07513ACAA1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Fatty acid metabolismmap01212
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592
Biosynthesis of unsaturated fatty acidsmap01040
Cysteine and methionine metabolismmap00270
Peroxisomemap04146
PPAR signaling pathwaymap03320

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity
GO:0016747Molecular Functiontransferase activity, transferring acyl groups other than amino-acyl groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms236.900
SRR2545915Juvenile tuber292.740
SRP108465SRR5643513five period of Gastrodia elata292.510
SRR5643514five period of Gastrodia elata375.320
SRR5643515five period of Gastrodia elata297.250
SRR5643524five period of Gastrodia elata372.240
SRR5643525five period of Gastrodia elata258.030
SRR5643528five period of Gastrodia elata334.660
SRR5643658five period of Gastrodia elata280.310
SRR5643659five period of Gastrodia elata217.580
SRR5643660five period of Gastrodia elata231.410
SRR5643661five period of Gastrodia elata224.570
SRR5643662five period of Gastrodia elata194.650
SRR5643663five period of Gastrodia elata204.300
SRR5643664five period of Gastrodia elata208.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1338.320
SRR6049655Rhizomagastrodiae_C368-T10_good_1321.420
SRR6049656Rhizomagastrodiae_C368-T07_good_1375.840
SRR6049657Rhizomagastrodiae_C368-T07_good_1299.800
SRR6049658Rhizomagastrodiae_C368-T04_good_1311.530
SRR6049659Rhizomagastrodiae_C368-T04_good_1365.340
SRR6049660Rhizomagastrodiae_C368-T01_good_1305.180
SRR6049661Rhizomagastrodiae_C368-T04_good_1321.320
SRR6049662Rhizomagastrodiae_C368-T01_good_1370.000
SRR6049663Rhizomagastrodiae_C368-T01_good_1354.770
SRR6049664Rhizomagastrodiae_C368-T10_good_1441.110
SRR6049665Rhizomagastrodiae_C368-T10_good_1441.110
SRP279888GastroGastrodia elata tuber 270.76
JuvenJuvenile tuber346.92
Mother_GastroMother tuber of Gastrodia elata 361.95
Mother_JuvenMother tuber of Juvenile 359.75