Detail information of GWHGAAEX006727/evm.TU.scaffold_19.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00282.00E-35Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein
nrgi|743785566|ref|XP_010921941.1|5.30E-54PREDICTED: calcium-binding protein KIC-like [Elaeis guineensis]
Swissprottr|Q9LSQ6|PBP1_ARATH7.00E-36Calcium-binding protein PBP1
trEMBLtr|M0T1W1|M0T1W1_MUSAM2.00E-49Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P26360_001}
TAIRAT5G544902.00E-35pinoid-binding protein 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002011674791167838+
Transcript Sequence

Network for GWHGAAEX006727

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13833.5EF-hand_840911.10E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms157.590
SRR2545915Juvenile tuber207.320
SRP108465SRR5643513five period of Gastrodia elata152.620
SRR5643514five period of Gastrodia elata116.720
SRR5643515five period of Gastrodia elata279.320
SRR5643524five period of Gastrodia elata69.120
SRR5643525five period of Gastrodia elata815.880
SRR5643528five period of Gastrodia elata585.200
SRR5643658five period of Gastrodia elata418.260
SRR5643659five period of Gastrodia elata471.400
SRR5643660five period of Gastrodia elata193.680
SRR5643661five period of Gastrodia elata354.760
SRR5643662five period of Gastrodia elata576.350
SRR5643663five period of Gastrodia elata329.660
SRR5643664five period of Gastrodia elata1663.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11049.420
SRR6049655Rhizomagastrodiae_C368-T10_good_1479.560
SRR6049656Rhizomagastrodiae_C368-T07_good_1704.100
SRR6049657Rhizomagastrodiae_C368-T07_good_1849.960
SRR6049658Rhizomagastrodiae_C368-T04_good_1861.820
SRR6049659Rhizomagastrodiae_C368-T04_good_1990.990
SRR6049660Rhizomagastrodiae_C368-T01_good_1960.150
SRR6049661Rhizomagastrodiae_C368-T04_good_1824.590
SRR6049662Rhizomagastrodiae_C368-T01_good_1398.330
SRR6049663Rhizomagastrodiae_C368-T01_good_1870.530
SRR6049664Rhizomagastrodiae_C368-T10_good_1673.070
SRR6049665Rhizomagastrodiae_C368-T10_good_1673.070
SRP279888GastroGastrodia elata tuber 337.70
JuvenJuvenile tuber19.54
Mother_GastroMother tuber of Gastrodia elata 365.58
Mother_JuvenMother tuber of Juvenile 88.73