Detail information of GWHGAAEX006728/evm.TU.scaffold_19.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|347756711|ref|YP_004864274.1|5.00E-23protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
nrgi|743875688|ref|XP_010907389.1|0PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 [Elaeis guineensis]
Swissprottr|O81906|B120_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase B120 (Precursor)
trEMBLtr|A0A068TUN3|A0A068TUN3_COFCA0Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}
TAIRAT4G213900S-locus lectin protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002011850641195615+
Transcript Sequence

Network for GWHGAAEX006728

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01453.23B_lectin741761.40E-34
PF00954.19S_locus_glycop2073146.80E-26
PF08276.10PAN_23343932.40E-18
PF07714.16Pkinase_Tyr5117771.90E-49
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_DLSV

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0048544Biological Processrecognition of pollen
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0004674Molecular Functionprotein serine/threonine kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.950
SRR2545915Juvenile tuber20.650
SRP108465SRR5643513five period of Gastrodia elata11.520
SRR5643514five period of Gastrodia elata14.880
SRR5643515five period of Gastrodia elata24.720
SRR5643524five period of Gastrodia elata24.890
SRR5643525five period of Gastrodia elata59.870
SRR5643528five period of Gastrodia elata84.650
SRR5643658five period of Gastrodia elata90.630
SRR5643659five period of Gastrodia elata29.380
SRR5643660five period of Gastrodia elata20.300
SRR5643661five period of Gastrodia elata25.130
SRR5643662five period of Gastrodia elata20.100
SRR5643663five period of Gastrodia elata17.430
SRR5643664five period of Gastrodia elata25.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.160
SRR6049655Rhizomagastrodiae_C368-T10_good_16.980
SRR6049656Rhizomagastrodiae_C368-T07_good_111.180
SRR6049657Rhizomagastrodiae_C368-T07_good_113.450
SRR6049658Rhizomagastrodiae_C368-T04_good_110.380
SRR6049659Rhizomagastrodiae_C368-T04_good_110.980
SRR6049660Rhizomagastrodiae_C368-T01_good_118.280
SRR6049661Rhizomagastrodiae_C368-T04_good_112.500
SRR6049662Rhizomagastrodiae_C368-T01_good_112.580
SRR6049663Rhizomagastrodiae_C368-T01_good_118.030
SRR6049664Rhizomagastrodiae_C368-T10_good_19.670
SRR6049665Rhizomagastrodiae_C368-T10_good_19.670
SRP279888GastroGastrodia elata tuber 21.94
JuvenJuvenile tuber19.24
Mother_GastroMother tuber of Gastrodia elata 36.43
Mother_JuvenMother tuber of Juvenile 26.49