Detail information of GWHGAAEX006729/evm.TU.scaffold_19.42


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|194336180|ref|YP_002017974.1|5.00E-24serine/threonine protein kinase [Pelodictyon phaeoclathratiforme BU-1]
nrgi|743875688|ref|XP_010907389.1|0PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 [Elaeis guineensis]
Swissprottr|O81906|B120_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase B120 (Precursor)
trEMBLtr|A0A068TUN3|A0A068TUN3_COFCA0Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}
TAIRAT4G213900S-locus lectin protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002012113821228903-
Transcript Sequence

Network for GWHGAAEX006729

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01453.23B_lectin1152181.20E-34
PF00954.19S_locus_glycop2483572.00E-24
PF08276.10PAN_23824423.50E-16
PF07714.16Pkinase_Tyr5608267.30E-50
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_DLSV

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0048544Biological Processrecognition of pollen
GO:0006468Biological Processprotein phosphorylation
GO:0004674Molecular Functionprotein serine/threonine kinase activity
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.080
SRR2545915Juvenile tuber13.840
SRP108465SRR5643513five period of Gastrodia elata22.330
SRR5643514five period of Gastrodia elata18.590
SRR5643515five period of Gastrodia elata46.940
SRR5643524five period of Gastrodia elata23.740
SRR5643525five period of Gastrodia elata26.740
SRR5643528five period of Gastrodia elata34.110
SRR5643658five period of Gastrodia elata19.660
SRR5643659five period of Gastrodia elata35.500
SRR5643660five period of Gastrodia elata25.650
SRR5643661five period of Gastrodia elata38.370
SRR5643662five period of Gastrodia elata31.040
SRR5643663five period of Gastrodia elata29.320
SRR5643664five period of Gastrodia elata26.920
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.140
SRR6049655Rhizomagastrodiae_C368-T10_good_112.700
SRR6049656Rhizomagastrodiae_C368-T07_good_113.510
SRR6049657Rhizomagastrodiae_C368-T07_good_116.090
SRR6049658Rhizomagastrodiae_C368-T04_good_123.320
SRR6049659Rhizomagastrodiae_C368-T04_good_127.360
SRR6049660Rhizomagastrodiae_C368-T01_good_120.170
SRR6049661Rhizomagastrodiae_C368-T04_good_119.370
SRR6049662Rhizomagastrodiae_C368-T01_good_115.110
SRR6049663Rhizomagastrodiae_C368-T01_good_120.490
SRR6049664Rhizomagastrodiae_C368-T10_good_113.090
SRR6049665Rhizomagastrodiae_C368-T10_good_113.090
SRP279888GastroGastrodia elata tuber 12.06
JuvenJuvenile tuber33.13
Mother_GastroMother tuber of Gastrodia elata 66.72
Mother_JuvenMother tuber of Juvenile 120.76