Detail information of GWHGAAEX006733/evm.TU.scaffold_19.46


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17216.00E-13FOG: Zn-finger
nrgi|703118241|ref|XP_010101559.1|1.12E-19hypothetical protein L484_015383 [Morus notabilis]
trEMBLtr|W9RFU2|W9RFU2_9ROSA4.00E-20Uncharacterized protein {ECO:0000313|EMBL:EXB88698.1}
TAIRAT1G720506.00E-13transcription factor IIIA

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002012951221298464+
Transcript Sequence

Network for GWHGAAEX006733

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.400
SRR2545915Juvenile tuber0.940
SRP108465SRR5643513five period of Gastrodia elata0.610
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.430
SRR5643524five period of Gastrodia elata0.130
SRR5643525five period of Gastrodia elata0.470
SRR5643528five period of Gastrodia elata0.470
SRR5643658five period of Gastrodia elata0.230
SRR5643659five period of Gastrodia elata0.370
SRR5643660five period of Gastrodia elata0.820
SRR5643661five period of Gastrodia elata0.280
SRR5643662five period of Gastrodia elata1.240
SRR5643663five period of Gastrodia elata0.520
SRR5643664five period of Gastrodia elata1.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.290
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.360
SRR6049657Rhizomagastrodiae_C368-T07_good_10.440
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.120
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.110
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 1.38
JuvenJuvenile tuber0.13
Mother_GastroMother tuber of Gastrodia elata 0.71
Mother_JuvenMother tuber of Juvenile 0.79