Gene detail

Detail information of GWHGAAEX006745/evm.TU.scaffold_19.60

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672129332\|ref\|XP_008788172.1\|	8.48E-103	PREDICTED: uncharacterized protein LOC103706017 [Phoenix dactylifera]
trEMBL	tr\|M0T7Q1\|M0T7Q1_MUSAM	7.00E-95	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P17030_001}
trEMBL	tr\|M0T7Q1\|M0T7Q1_MUSAM	1.00E-23	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P17030_001}
TAIR	AT5G16720	4.00E-87	Protein of unknown function, DUF593

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000020	1492970	1495516	-

Transcript Sequence
>GWHTAAEX006745 AAAGATGCAAATTGTTCTCAATCTAATTTAATGAATTTTGTTGAGATCTAAATAGCATTTCTGAAAAATAAAATGATACGGCGCAGTCTGCGGATGGATCAATGAATAAACGAAATGACGGTGAGCTTAAGACCGAGCCTGTGAAGAAGCGCTTTTGTAGAGAGCTCTCTGCTTATCTGACGGACACTTCTCGTCCCCATCCTCCTTATAAGCGGAATCCCAACGCCCTCAGAATATCAAACTCCCACTTCTCACAACTTCCCTAGCTTCCTTGACCCTCCCTGTGAGCTCTCACCATCTGCAAATGCAGCCGGCCAACAAATTCGCAACTGCCCTTCACCGAAACACCAATAGAATGGTGTTCCTGCTGATATACACGACTCTTGAATGGATCCTCCTGGTCCTCCTCCTTCTCAACGCCCTCTTCTACTACGCAATCTCAAAGTTTGCGTCTTTGGTCGGATTGGATCCCCCCTGCTTCTTCTGCTCCAGGATCGATCACCACTTCGAGCCCGGGAAGTCCTGGTGCGATTTCCTCTGCGAGTCCCATGCCGGAGAAATCTCTAAGCTCGGCGAGGAATGCGCTTCACTTCTTCCCAGGGGGAATTTGATCAAAGGCCCGAGCTTTGGGCTGGAGGAAGATCCCAAAGCTGCCGCCTTTTCCCCTTCTGCTCAGGATGTAAAGGAGGATGCTTCGGCGGCTTTCCTTGCCGTTCGTGTGGACTCCAAGGTTGACTCGGAAAGAGTCATTTTCATTGAATCCATCGATTCGTTTACTTTGATGAACTATCCGGCCCCTGAACCGCAGAAAGCTGAAAAGCATCTGGCTTCTGAAGAAGATGGAAAAGGAGATGATGAAGCTAACTGTCTTGAGAAATCCATTATGAATGAAATATGTGATCATGAACAGATTGTCACCCAGTTCGAAGCTATGAATCATAAAAATGAAATTAGTGCTGCTGAATCTGAACAAATTATTGACCCAATTCTGGATGAAACTGAGACGCCCACAACCCCCAATTATACAGATTCTTTGTCTGTTCTGAGCAAGAGGTTTCTGTTAGACAGGAGAGAATTTGGGGGTGAAACATTGGATGGATGCACTGGCAGCGATGTCTCAGACAGCAACCTTGAGCCGGCGGTGGCCGTGGACCGCCTCAGAGTCGCTCTGAAATCGGAACGGGAGGCCTTGATTGCACTGCACGCCGAGCTCGAAGAAGAAAGGAACGCCTCCGCCGTCGCTGCGAACCAGACGATGGCGATGATAACTAGGCTTCAAGAGGAGAAGTCTGCAATGCAGATGGAAGCTGTGCAGTATCAGAGGATGATGGAGGAGCAAGCAGAGTATGATCAAGAGGCCTTGCAGCTCCTCAATGATCTGATGTTCAAGAGGGAGAAGGAGAAGCAGGAATTGGAGAAGGAACTCGATGCCTATCGCCACAAGGTCCGGGTTTACGAGGCCATCGAGAGAAGGAAGATACCTTCGAGCCCAGAGGAGAGCGAGAATGACTGCCGGAATTTGTTGGAAGGAGAAGAATATGAAGAAGATGAGCAGCATCTCATCACATTGGATGACCCCTTGGCTGATTTTGAGGAGGAGAGACTTTCCATACTTGTGCAGCTCAAGGCTTTAGAGGAGAAGCTTGTGAGAATGGATGATGAAGAAGATGGCTCTGTTGTCAAATTAAAAAAAGAGAAGCTTTTTCCTATGGAAAACGGTCATCTGATCAATGGGGAATGCAAGCAAGGTTCTTTTGATGCCATTAGCTTAGAAATGGGAGATGAGCCTAACTTCAGCCCTGATTCAGCTGATGCTTCCCACAAGAAGCAGGCTATTGCTGAAGAAGTCGATCATGTATACGAGAGGCTGCATGCTCTTGAAGCGGATCGCAAATTTCTCAAGCACTGTGTGTCTTCCTTGAAGAAGGGGGACAGGGGAATGGATCTGCTTGAGGAAATTCTTCTTAATCTTCGTGATTTGAGGGCTGTGGAGCTCCATTCGTGGCTTGTTGATGCATATTGATCTATCAACTGCTTTTCCTTCTGCTTATGGCTTTGTAAAGTTCGAAGCTTTTTTGATGAAGGTGAACATGGCATGAAGGCTGAAGGAAAAGGGGGTTTCTTGCACAATTCTGGGCTTTTCTTTTTATTTTTTTTCTTTAATGAAATGGAAAGGCCACCCTAATGATGTCGCTGTGGTGGAAATCATGGCTTGCAAAGCTGGCCGTATAGAAGTATCAGTGGAGTTCCCTTTTTTTTCTTTAATTGTTACTAAACAGAGTCTTAAGAGTTTTATTTATCATTATTAATTAATACAAGATGATGTAAAATATTTTAATAATAAATATAGAACAAGTACGGTTGATTACTAC

Network for GWHGAAEX006745

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module5

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04576.14	Zein-binding	284	374	1.00E-32

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.320
SRP064423	SRR2545915	Juvenile tuber	2.680
SRP108465	SRR5643513	five period of Gastrodia elata	12.770
	SRR5643514	five period of Gastrodia elata	31.840
	SRR5643515	five period of Gastrodia elata	21.510
	SRR5643524	five period of Gastrodia elata	38.260
	SRR5643525	five period of Gastrodia elata	2.580
	SRR5643528	five period of Gastrodia elata	2.590
	SRR5643658	five period of Gastrodia elata	1.730
	SRR5643659	five period of Gastrodia elata	2.430
	SRR5643660	five period of Gastrodia elata	3.600
	SRR5643661	five period of Gastrodia elata	2.660
	SRR5643662	five period of Gastrodia elata	2.020
	SRR5643663	five period of Gastrodia elata	1.780
	SRR5643664	five period of Gastrodia elata	4.870
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.330
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	24.320
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.650
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.800
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.370
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.220
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.610
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.500
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.180
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.130
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	24.300
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	24.300
SRP279888	Gastro	Gastrodia elata tuber	1.76
	Juven	Juvenile tuber	2.80
	Mother_Gastro	Mother tuber of Gastrodia elata	4.88
	Mother_Juven	Mother tuber of Juvenile	2.13