Detail information of GWHGAAEX006747/evm.TU.scaffold_19.62


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG39992.00E-146Checkpoint 9-1-1 complex, HUS1 component
nrgi|700257289|gb|AIU50251.1|0Hus1-like protein, partial [Iris japonica]
trEMBLtr|A0A097PQH5|A0A097PQH5_9ASPA0Hus1-like protein {ECO:0000313|EMBL:AIU50251.1} (Fragment)
TAIRAT1G525302.00E-146Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002015021871503140+
Transcript Sequence

Network for GWHGAAEX006747

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04005.11Hus112961.10E-66
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10903HUS1 Cellular senescence map04218

Gene Ontology

GO term OntologyName
GO:0000077Biological ProcessDNA damage checkpoint
GO:0005730Cellular Componentnucleolus
GO:0030896Cellular Componentcheckpoint clamp complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.600
SRR2545915Juvenile tuber2.940
SRP108465SRR5643513five period of Gastrodia elata9.670
SRR5643514five period of Gastrodia elata8.180
SRR5643515five period of Gastrodia elata7.400
SRR5643524five period of Gastrodia elata8.760
SRR5643525five period of Gastrodia elata9.980
SRR5643528five period of Gastrodia elata10.940
SRR5643658five period of Gastrodia elata10.210
SRR5643659five period of Gastrodia elata10.920
SRR5643660five period of Gastrodia elata15.080
SRR5643661five period of Gastrodia elata13.080
SRR5643662five period of Gastrodia elata13.080
SRR5643663five period of Gastrodia elata11.020
SRR5643664five period of Gastrodia elata7.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.630
SRR6049655Rhizomagastrodiae_C368-T10_good_110.050
SRR6049656Rhizomagastrodiae_C368-T07_good_19.890
SRR6049657Rhizomagastrodiae_C368-T07_good_16.030
SRR6049658Rhizomagastrodiae_C368-T04_good_19.100
SRR6049659Rhizomagastrodiae_C368-T04_good_17.020
SRR6049660Rhizomagastrodiae_C368-T01_good_110.410
SRR6049661Rhizomagastrodiae_C368-T04_good_18.970
SRR6049662Rhizomagastrodiae_C368-T01_good_112.190
SRR6049663Rhizomagastrodiae_C368-T01_good_113.000
SRR6049664Rhizomagastrodiae_C368-T10_good_112.320
SRR6049665Rhizomagastrodiae_C368-T10_good_112.320
SRP279888GastroGastrodia elata tuber 9.63
JuvenJuvenile tuber10.87
Mother_GastroMother tuber of Gastrodia elata 8.20
Mother_JuvenMother tuber of Juvenile 4.22