Gene detail

Detail information of GWHGAAEX006751/evm.TU.scaffold_19.66

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672184663\|ref\|XP_008812622.1\|	0	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103723483 [Phoenix dactylifera]
trEMBL	tr\|M0U4U8\|M0U4U8_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P30410_001}
TAIR	AT2G34670	4.00E-61	Protein of unknown function (DUF630 and DUF632)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000020	1674453	1693118	-

Transcript Sequence
>GWHTAAEX006751 CATAACCCCACTTGTCTTCTGGAGATCTTTTTTTCTCTCCACTCACTGACCACAGTGCTTCCCTCCTTTGTCTTCTCTGAGCCCTTTCAGTGAATCCAGGCACGCAATTCCACTTAGACAGAAAGATAGCGACAGACTGACACTTGACAGCCATGCGAGCTTCGGACAGTATCTGTGCCTCACTCTGCTCTGCTCCTCCTCATCGGCTTCGCCTTTAGATAGGTTCAGGAATTCCGGCGTTGCTACTTCAGAGCAACACCAATGACGCCTCTTCGCTCTCATCCTCCGTTCTTGCTCTTTTCCGATCGGATCTTCTGATGCAACTTTAAAAAACTTTTTCCCTGAGTTCTTTCTCTGCAATCGAAAGACTACCTCCTCTGATCATCTTAGTTAGATTTGTACGGCAAAATGGGTTGTGCCTACTCGAGAGTGGAAAAGGAGGAAACTGTGTGGAGATGCAGGGAGAGGAAAAGGCTAATGAAGCTTCTCCTTAACTGCAGATCAGATCTTGCTGCTGCTCACATTTCTTATCTCCAATCATTGAGGAACACAGGCGCCACTCTCCGGCAGTTTGCCGAGGTTGAGTCCGAGTTTTCTGGCAGCTCGCCTCCTCGCGGTGTATTTCCCTCATCGCTGCCTCCTCCTCCTCCTCCTCCGCCACCTTCTCTCCCACCATCTCCTCCACATTCTCCATCCCCTCCTAATTTTAACACATTTAAAAAGGCAACAGATGTGGATGAAAGAAGCAGCAATGATGACGATGATTCTTCGATTGGTATAGATACTGATGACGACAACGACGATGATCTTGATAATCGCAGTTGCATGCCTCCACCTCCTCCCATTCAGTGCTTAGATTCTGATTTCTGGGCTTCATTTAGCCTTCCGTCCTGTTCTAATTCTGCTTCGCCAGTAATATTGAAGAAGAAGGTTGATGGGATGAGAATGCTGGAGGATGAAGAGAAGTGGGTTGAGACTGTGACAGAGTTCGAAGATGAGGAAGGAGATAAGAGGAATGAAGGATCCTGTGCAGATATGACATTAATTTCTCTTAAAGAGAGGCTGCCTTCAAGGGAATTGATTGATGATAACTCCTCCACAGTTAGTAGGGTCACCAAGGAAACTGATGTAGAGATGGAGGCATGGAGGAGCAAGAAGACATTGGCAAGTATGATGAAGGAGATTGATGATTATTTCTTGAAGGCTGCTGCTGGTGGCAGCGATCTATTAGCTCTTTTGGGATCTAGCCATGGACAAAGCCTTGAAAGCAATTTCATGGAAACTAAAGGAAAAACTTCAAAATCTGCGAAGGTTTTGTCATGGAATTGGTCTCTTAAATCTCCTCATTCGAATAGAGCTTCTTGTGGCCAAAAGTATTGCGAAACATGTAGGCCGAGTAAACATCGCACCACCCTTGAGAAGATTTATGCCGAAGAGGAGAAACTTTACAAGGAAGTTAAGGAGGATGAGCTCGTGAAAATTCAACTAAAGAAGATGGCCTTGTCACTTGAGAAGCTTCACACAATTGAGAATGACTATGCAAGGTGTGAAAAATTGCAATCAGATATTGAAATTTTGCAGACTCAAATCCTTTCTCTGCAAGAATCAATTAATGCAACGTGCTTATCAATATCAAAATTAAGGGATGAGGAACTGCATCCACAGTTACTGGAGTTAATATCTGGGCTTTTGTGCATGTGGAGAACTATGTATGAGTGCCACCAAGTTCAGAACCATATTTCTCAACGGGCAACACTTGTTGACATTCATCCAGGAACTGAACCGACAACTGATTCCCATTGCCTTGCCACAGTTCAGCTGGAAAATGAGGTTTCATCTTGGCACACTTCTTTCTTTGAACTACTCAAATCTCTGCGTGCATATATCCATATCCTCAATCAATGGGTCCGGCTTACTGACTGCCTTCCCTATTGTAATAATGTTCCCAGTTTCACAAAAGGGATTCACTCTCTTTGTGAAGAATGGAAGCTGGCTCTTGATCAATTACCAGATAAGGCATCTGCGGATTCGATAAAGAGCCTCGTCACGGTTATCCACTCCGTAGTTCTTCAGCAAAAAGCAGAACTCAGCCTTCAAAAGAAATCAAAGCGGCTCGAAAGCAGGCTGGAGAAGGAACTAAAAAACAGCAATCCTGCTCGAAGCACAGGCCCTGAAAGCCATTCATCATCAAATAATGCAAAGTTAGATGCCCTCGACAGGAAGGTGAAGGAGGAGAAGGCCAAATATCGGAGCTCCATTTGCTCCAGCCGAGCCATAGCACTGAACAATCTCCACACGAGCCTGCCAAATGTTTTCCGAGCCCTCGCTGGGTTCTCAAATGCATGCCTCCAAGCCTTCGACAGCATTGCGGAAGCTCAGGCAGACGCCCCTTAGCAATGCCAGGGGGGTGGATTTCTGTAGCGATTTGCTTCAAAAGTGTGAAAGATTAAACAAGATTATTCCAGCTAGATTTTTTTATGCTGATGGATATTACTAGGGTGGAACCAGCTTTGCTCGACTGCGCAAGCATTAAAATAATCAGAAGTGATTATCAAAACTGTGTGCTTATTAATTAACCTTCACTTTCCGATTCCCAATTGTGCCAATCGCTAGCTGTATAATAAGCTTGGTTGGTTAATCAATGAGCCATTCTGAATAATTTTCATTCTTATTTCTTGTTGCTTAGTTCGGAATGATTTTGTGGATTAAATGTGTTAAAAAGATGGGTTAAGCTACGCTGTTCAATTGCGTTTATTTTAAACTTGGATGAGCTAATCTATCAAAATTATGAATGCTATTCCGTTCGTTATCCC

Network for GWHGAAEX006751

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04783.11	DUF630	1	59	3.80E-24
PF04782.11	DUF632	252	550	4.00E-77

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	46.530
SRP064423	SRR2545915	Juvenile tuber	33.980
SRP108465	SRR5643513	five period of Gastrodia elata	26.240
	SRR5643514	five period of Gastrodia elata	24.530
	SRR5643515	five period of Gastrodia elata	19.330
	SRR5643524	five period of Gastrodia elata	21.630
	SRR5643525	five period of Gastrodia elata	22.740
	SRR5643528	five period of Gastrodia elata	22.420
	SRR5643658	five period of Gastrodia elata	28.020
	SRR5643659	five period of Gastrodia elata	26.720
	SRR5643660	five period of Gastrodia elata	26.930
	SRR5643661	five period of Gastrodia elata	23.170
	SRR5643662	five period of Gastrodia elata	23.250
	SRR5643663	five period of Gastrodia elata	27.100
	SRR5643664	five period of Gastrodia elata	27.620
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	40.520
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	30.470
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	35.110
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	46.360
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	44.120
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	55.300
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	45.730
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	48.360
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	37.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	34.290
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	31.690
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	31.690
SRP279888	Gastro	Gastrodia elata tuber	17.69
	Juven	Juvenile tuber	41.01
	Mother_Gastro	Mother tuber of Gastrodia elata	8.32
	Mother_Juven	Mother tuber of Juvenile	9.02