Gene detail

Database	Orthologs	E value	Annotation
KOG	KOG3036	1.00E-103	Protein involved in cell differentiation/sexual development
nr	gi\|414585484\|tpg\|DAA36055.1\|	2.97E-116	TPA: cell differentiation protein rcd1 [Zea mays]
trEMBL	tr\|A0A096QIX1\|A0A096QIX1_MAIZE	1.00E-116	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GRMZM2G045331_P04}
TAIR	AT3G20800	1.00E-103	Cell differentiation, Rcd1-like protein

Scaffold	Start	End	Strand
GWHAAEX00000020	1800133	1849049	+

Transcript Sequence
>GWHTAAEX006754 CGGCTTGAAACTGTGAAGATGAATAGGGCGGGCAGTTCCTTCTTCTCGCCAGATTAGAAGGACCAAAATCAGCATAATCGAAGCGGCGCTCTCTCTCTATCTCTTCTCAGAAATTTTGGTGCTATCGGATCTTAATCTGCCATCAATAATGGCGAACATGCCATTCTCGTATTCGGTCGATCCTCAATTTCGCTCGTTGGGCTTGCTGACTCCGCCTCATCCTCAGCCTCCGGGCCACGGCGGTGGAGGAACAGATAGAGACCGGATTCTGGCGTCTGCGGTGCAGTTAGTACACAACATTTGCGATCCCATGCTGCGGGAGAGAGCGCTGACCGATTTATCCAAGAAAAGAGAGATCTTTTATGATCTAGCTCCAATATTGTGGGAATCTTTTGGCGCAATTACGGTACTTTTGAAGTGTATAGCTTCTCATCCGGATACAAAAATACCTTTCCTTAATGCTCATATTCCTCTATATTTGTACCCTTTTTTGAATACTACAATCAAGAGCAGGCCTTTTGAATATCTTAGATTGACTAGCTTGGGTGTTATTGGAGCTCTCGTAAAGATTGATGATGCTGAGGCTGTTCGCTTTCTTCTTCATACAGAAATAGTTCCCTTGTGTCTACGTACAATGGAAAATGGAACTGAGCTATCAAGAACAGTGGCAACCTTCATTATTGAAAAAATTTTAGTTGATGAGCTCGGGCTTCGATACGTGAGCACAAAAGCGGACCGGTTCTATGCTGTGACTCACATTCTTCGAGCCATGGTTGAATCACCAGCCGATAAGCTTTCTGCGAGGCTGCTCAAGCACATCATTCGTTGTTACCTGCGACTTACAGAGGATGAAAGATCCCAGTGTTGCGTTGTTCTGCACGAAATCCTCCCTACGATGTTTAGAGATGGATCGGTGGAAAAATACTTTCGTGATGATCCAGTTACCCGGTACTATCTTCAGCAGCTGCTTGTCAATGTGTATGGAGACGTAAGGGTGTATGGCTTTGAGGGAGGTATTGATCGATTATCGGAGCTTTAA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04078.12	Rcd1	47	90	1.40E-08
PF04078.12	Rcd1	88	277	2.60E-76

Protein Sequence

Gene family	subfamily
Transcription Factors Family	Rcd1-like

KO	Enzyme	pathway	mapID
K12606	RCD1, CNOT9, CAF40	RNA degradation	map03018

GO term	Ontology	Name

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.630
SRP064423	SRR2545915	Juvenile tuber	2.100
SRP108465	SRR5643513	five period of Gastrodia elata	1.290
	SRR5643514	five period of Gastrodia elata	2.380
	SRR5643515	five period of Gastrodia elata	1.440
	SRR5643524	five period of Gastrodia elata	1.630
	SRR5643525	five period of Gastrodia elata	6.430
	SRR5643528	five period of Gastrodia elata	1.910
	SRR5643658	five period of Gastrodia elata	3.530
	SRR5643659	five period of Gastrodia elata	1.050
	SRR5643660	five period of Gastrodia elata	0.920
	SRR5643661	five period of Gastrodia elata	1.630
	SRR5643662	five period of Gastrodia elata	1.000
	SRR5643663	five period of Gastrodia elata	1.400
	SRR5643664	five period of Gastrodia elata	1.420
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	2.590
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.330
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.580
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.700
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.990
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.210
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.800
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.820
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.190
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.170
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.400
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.400
SRP279888	Gastro	Gastrodia elata tuber	2.60
	Juven	Juvenile tuber	1.46
	Mother_Gastro	Mother tuber of Gastrodia elata	2.44
	Mother_Juven	Mother tuber of Juvenile	2.55